Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 AL590560.3-201ENST00000623350 461 ntBASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 KRT8P12-202ENST00000472924 1397 ntBASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 AC100757.3-201ENST00000622361 1406 ntBASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 AL596087.1-201ENST00000400979 1969 ntBASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 CETN4P-206ENST00000642099 2168 ntBASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARHGEF39Q8N4T4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 HIST3H2BA-201ENST00000436555 524 ntBASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 AC004890.2-204ENST00000481968 304 ntBASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 SPCS2P1-201ENST00000561636 679 ntBASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 AL589739.1-201ENST00000607720 493 ntBASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 AL844908.2-201ENST00000609461 460 ntBASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 OR6D1P-203ENST00000641209 4860 ntBASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ARHGEF39Q8N4T4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 AC099398.1-201ENST00000567919 2776 ntBASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 BCRP1-201ENST00000444246 691 ntBASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 AC027369.6-201ENST00000525520 931 ntBASIC15.29■□□□□ 0.04
ARHGEF39Q8N4T4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms