Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPOQ8N3V7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 AGGF1P2-201ENST00000426656 2106 ntBASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 AC007389.4-201ENST00000454674 793 ntBASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 ELK1P1-201ENST00000485699 580 ntBASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 AC023310.3-201ENST00000557027 670 ntBASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 AC100756.1-201ENST00000562736 682 ntBASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 AC138749.3-201ENST00000567691 622 ntBASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 TMEM261P1-201ENST00000604899 340 ntBASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 AC116165.1-201ENST00000611806 668 ntBASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.48■□□□□ 0.23
SYNPOQ8N3V7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms