Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MIR6869-201ENST00000619434 62 ntBASIC16.67■□□□□ 0.26
SIX5Q8N196 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.67■□□□□ 0.26
SIX5Q8N196 BICD1-207ENST00000551848 1962 ntBASIC16.67■□□□□ 0.26
SIX5Q8N196 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SIX5Q8N196 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.67■□□□□ 0.26
SIX5Q8N196 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.67■□□□□ 0.26
SIX5Q8N196 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
SIX5Q8N196 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.67■□□□□ 0.26
SIX5Q8N196 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SIX5Q8N196 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX5Q8N196 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SIX5Q8N196 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.66■□□□□ 0.26
SIX5Q8N196 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
SIX5Q8N196 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.66■□□□□ 0.26
SIX5Q8N196 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 MIR1908-201ENST00000410394 80 ntBASIC16.66■□□□□ 0.26
SIX5Q8N196 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SIX5Q8N196 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.66■□□□□ 0.26
SIX5Q8N196 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SIX5Q8N196 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.66■□□□□ 0.26
SIX5Q8N196 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.66■□□□□ 0.26
SIX5Q8N196 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 AC016396.2-201ENST00000562575 1417 ntBASIC16.66■□□□□ 0.26
SIX5Q8N196 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.66■□□□□ 0.26
SIX5Q8N196 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SIX5Q8N196 AC010319.3-201ENST00000597028 470 ntBASIC16.66■□□□□ 0.26
SIX5Q8N196 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.66■□□□□ 0.26
SIX5Q8N196 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.66■□□□□ 0.26
SIX5Q8N196 AC018695.7-201ENST00000624587 2492 ntBASIC16.66■□□□□ 0.26
SIX5Q8N196 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.66■□□□□ 0.26
SIX5Q8N196 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SIX5Q8N196 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SIX5Q8N196 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 CLK3P2-201ENST00000427566 1453 ntBASIC16.66■□□□□ 0.26
SIX5Q8N196 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.66■□□□□ 0.26
SIX5Q8N196 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SIX5Q8N196 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.66■□□□□ 0.26
SIX5Q8N196 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIX5Q8N196 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SIX5Q8N196 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SIX5Q8N196 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 CDC14C-201ENST00000428251 1719 ntBASIC16.65■□□□□ 0.26
SIX5Q8N196 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.65■□□□□ 0.26
SIX5Q8N196 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.65■□□□□ 0.26
SIX5Q8N196 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SIX5Q8N196 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.65■□□□□ 0.26
SIX5Q8N196 BRWD1P1-201ENST00000401091 371 ntBASIC16.65■□□□□ 0.26
SIX5Q8N196 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 SPDYE17-201ENST00000412399 783 ntBASIC16.65■□□□□ 0.26
SIX5Q8N196 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.65■□□□□ 0.26
SIX5Q8N196 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.65■□□□□ 0.26
SIX5Q8N196 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.65■□□□□ 0.26
SIX5Q8N196 AC104596.2-201ENST00000512793 793 ntBASIC16.65■□□□□ 0.26
SIX5Q8N196 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.65■□□□□ 0.26
SIX5Q8N196 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.65■□□□□ 0.26
SIX5Q8N196 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SIX5Q8N196 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.65■□□□□ 0.26
SIX5Q8N196 AL583810.1-201ENST00000553344 1045 ntBASIC16.65■□□□□ 0.26
SIX5Q8N196 RRP7BP-205ENST00000566851 833 ntBASIC16.65■□□□□ 0.26
SIX5Q8N196 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SIX5Q8N196 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SIX5Q8N196 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SIX5Q8N196 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SIX5Q8N196 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SIX5Q8N196 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX5Q8N196 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms