Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 AC245100.5-201ENST00000452108 331 ntBASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 RNA5SP416-201ENST00000516838 111 ntBASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 AC105917.1-201ENST00000506637 2539 ntBASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 PMS2P7-201ENST00000506558 1336 ntBASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 AC002056.1-201ENST00000395613 760 ntBASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 HAUS4P1-201ENST00000406739 1145 ntBASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 FDX1P1-201ENST00000449115 551 ntBASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 PRYP6-201ENST00000514804 343 ntBASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 AL162727.3-201ENST00000635661 2787 ntBASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKL3Q8IVW4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 PAUPAR-201ENST00000630360 2965 ntBASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 AP005117.1-202ENST00000581724 1908 ntBASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 AL591424.1-201ENST00000442569 1213 ntBASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 AC112191.1-201ENST00000523689 701 ntBASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 AL121894.2-201ENST00000602977 491 ntBASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDKL3Q8IVW4 BX640515.1-201ENST00000617215 977 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms