Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC71Q8IV32 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.33■□□□□ 0.05
CCDC71Q8IV32 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC71Q8IV32 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC71Q8IV32 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CCDC71Q8IV32 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC71Q8IV32 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.33■□□□□ 0.05
CCDC71Q8IV32 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC71Q8IV32 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.33■□□□□ 0.05
CCDC71Q8IV32 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 AC006277.1-201ENST00000624348 1610 ntBASIC15.33■□□□□ 0.04
CCDC71Q8IV32 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 FAM58CP-201ENST00000435741 640 ntBASIC15.33■□□□□ 0.04
CCDC71Q8IV32 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 AP005117.1-202ENST00000581724 1908 ntBASIC15.33■□□□□ 0.04
CCDC71Q8IV32 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC71Q8IV32 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 AC006449.6-201ENST00000612330 2296 ntBASIC15.32■□□□□ 0.04
CCDC71Q8IV32 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 AL671710.1-201ENST00000610245 2349 ntBASIC15.32■□□□□ 0.04
CCDC71Q8IV32 SNX33P1-201ENST00000592116 1762 ntBASIC15.32■□□□□ 0.04
CCDC71Q8IV32 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 AC074386.1-202ENST00000463561 864 ntBASIC15.32■□□□□ 0.04
CCDC71Q8IV32 CYMP-203ENST00000474680 1263 ntBASIC15.32■□□□□ 0.04
CCDC71Q8IV32 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 RFPL4AP1-201ENST00000530883 850 ntBASIC15.32■□□□□ 0.04
CCDC71Q8IV32 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 AP002472.1-201ENST00000577490 586 ntBASIC15.32■□□□□ 0.04
CCDC71Q8IV32 AC013467.2-201ENST00000605472 835 ntBASIC15.32■□□□□ 0.04
CCDC71Q8IV32 AL139011.1-202ENST00000642063 584 ntBASIC15.32■□□□□ 0.04
CCDC71Q8IV32 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC71Q8IV32 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 LINC02228-204ENST00000642115 2962 ntBASIC15.31■□□□□ 0.04
CCDC71Q8IV32 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms