Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DENND4AQ7Z401 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 C1QBPP1-201ENST00000400117 770 ntBASIC16.46■□□□□ 0.22
DENND4AQ7Z401 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.46■□□□□ 0.22
DENND4AQ7Z401 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 MIR3615-201ENST00000581999 87 ntBASIC16.46■□□□□ 0.22
DENND4AQ7Z401 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
DENND4AQ7Z401 AC005695.3-201ENST00000614522 232 ntBASIC16.46■□□□□ 0.22
DENND4AQ7Z401 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 CALR4P-201ENST00000431943 946 ntBASIC16.45■□□□□ 0.22
DENND4AQ7Z401 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.45■□□□□ 0.22
DENND4AQ7Z401 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 AC136604.1-201ENST00000418535 575 ntBASIC16.44■□□□□ 0.22
DENND4AQ7Z401 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 KRT18P43-201ENST00000469825 1281 ntBASIC16.44■□□□□ 0.22
DENND4AQ7Z401 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND4AQ7Z401 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms