Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
UBE3BQ7Z3V4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 AP005018.1-201ENST00000525475 301 ntBASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 AL662799.1-202ENST00000614205 422 ntBASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 AL109936.8-201ENST00000641772 604 ntBASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 AL691432.1-201ENST00000596308 1422 ntBASIC20.19■□□□□ 0.82
UBE3BQ7Z3V4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 PCDHA14-201ENST00000506751 2298 ntBASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 AC114501.2-201ENST00000439631 535 ntBASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 AL132655.2-201ENST00000596276 594 ntBASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 MIR6069-201ENST00000620069 79 ntBASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE3BQ7Z3V4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UBE3BQ7Z3V4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms