Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 MYCLP2-201ENST00000449268 967 ntBASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 AC022210.1-201ENST00000449856 793 ntBASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 AC004461.2-201ENST00000629517 803 ntBASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 GGT3P-204ENST00000453783 1664 ntBASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC149Q6ZUS6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 FO393414.2-201ENST00000405153 598 ntBASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 AC234783.1-201ENST00000441761 496 ntBASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 AC099568.2-201ENST00000609194 695 ntBASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 AL109936.8-201ENST00000641772 604 ntBASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCDC149Q6ZUS6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 AC123567.1-201ENST00000548294 1261 ntBASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC149Q6ZUS6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC149Q6ZUS6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC149Q6ZUS6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CCDC149Q6ZUS6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms