Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 AC092068.3-201ENST00000587894 2016 ntBASIC13.9□□□□□ -0.18
LRRK2Q5S007 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 C1QBPP1-201ENST00000400117 770 ntBASIC13.9□□□□□ -0.18
LRRK2Q5S007 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 CD8B2-202ENST00000417670 633 ntBASIC13.9□□□□□ -0.18
LRRK2Q5S007 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.9□□□□□ -0.18
LRRK2Q5S007 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.19
LRRK2Q5S007 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LRRK2Q5S007 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.9□□□□□ -0.19
LRRK2Q5S007 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
LRRK2Q5S007 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 AC126915.1-201ENST00000522847 1038 ntBASIC13.89□□□□□ -0.19
LRRK2Q5S007 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 AC100757.4-201ENST00000626934 759 ntBASIC13.89□□□□□ -0.19
LRRK2Q5S007 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRK2Q5S007 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRK2Q5S007 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 RPSAP31-201ENST00000416648 895 ntBASIC13.88□□□□□ -0.19
LRRK2Q5S007 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms