Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.64■□□□□ 0.58
USH1GQ495M9 ME2P1-201ENST00000426028 1970 ntBASIC18.64■□□□□ 0.58
USH1GQ495M9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
USH1GQ495M9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
USH1GQ495M9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.64■□□□□ 0.57
USH1GQ495M9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USH1GQ495M9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.64■□□□□ 0.57
USH1GQ495M9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
USH1GQ495M9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.64■□□□□ 0.57
USH1GQ495M9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.64■□□□□ 0.57
USH1GQ495M9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.64■□□□□ 0.57
USH1GQ495M9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.64■□□□□ 0.57
USH1GQ495M9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.64■□□□□ 0.57
USH1GQ495M9 AL365330.1-201ENST00000607459 531 ntBASIC18.64■□□□□ 0.57
USH1GQ495M9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.64■□□□□ 0.57
USH1GQ495M9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 AC087499.5-201ENST00000452760 1342 ntBASIC18.64■□□□□ 0.57
USH1GQ495M9 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.64■□□□□ 0.57
USH1GQ495M9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
USH1GQ495M9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
USH1GQ495M9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.64■□□□□ 0.57
USH1GQ495M9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.64■□□□□ 0.57
USH1GQ495M9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.64■□□□□ 0.57
USH1GQ495M9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USH1GQ495M9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
USH1GQ495M9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.64■□□□□ 0.57
USH1GQ495M9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USH1GQ495M9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.63■□□□□ 0.57
USH1GQ495M9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.63■□□□□ 0.57
USH1GQ495M9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USH1GQ495M9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 FAM207CP-201ENST00000443486 507 ntBASIC18.63■□□□□ 0.57
USH1GQ495M9 COX20P2-201ENST00000452636 358 ntBASIC18.63■□□□□ 0.57
USH1GQ495M9 AC009477.1-201ENST00000452936 217 ntBASIC18.63■□□□□ 0.57
USH1GQ495M9 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.63■□□□□ 0.57
USH1GQ495M9 AL139010.1-201ENST00000454878 894 ntBASIC18.63■□□□□ 0.57
USH1GQ495M9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.63■□□□□ 0.57
USH1GQ495M9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.63■□□□□ 0.57
USH1GQ495M9 AC009407.1-201ENST00000568958 598 ntBASIC18.63■□□□□ 0.57
USH1GQ495M9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.63■□□□□ 0.57
USH1GQ495M9 AC008738.7-201ENST00000609744 511 ntBASIC18.63■□□□□ 0.57
USH1GQ495M9 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
USH1GQ495M9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
USH1GQ495M9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.63■□□□□ 0.57
USH1GQ495M9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 PCDHA14-201ENST00000506751 2298 ntBASIC18.63■□□□□ 0.57
USH1GQ495M9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.63■□□□□ 0.57
USH1GQ495M9 AL592424.1-201ENST00000563624 1536 ntBASIC18.63■□□□□ 0.57
USH1GQ495M9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.63■□□□□ 0.57
USH1GQ495M9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 AL136982.4-201ENST00000437689 1740 ntBASIC18.63■□□□□ 0.57
USH1GQ495M9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.63■□□□□ 0.57
USH1GQ495M9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USH1GQ495M9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.62■□□□□ 0.57
USH1GQ495M9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
USH1GQ495M9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 AL662844.4-201ENST00000606367 2838 ntBASIC18.62■□□□□ 0.57
USH1GQ495M9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.62■□□□□ 0.57
USH1GQ495M9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.62■□□□□ 0.57
USH1GQ495M9 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.62■□□□□ 0.57
USH1GQ495M9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
USH1GQ495M9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.62■□□□□ 0.57
USH1GQ495M9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms