Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01559Q495D7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01559Q495D7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC01559Q495D7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01559Q495D7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01559Q495D7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01559Q495D7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01559Q495D7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01559Q495D7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01559Q495D7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01559Q495D7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01559Q495D7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01559Q495D7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01559Q495D7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01559Q495D7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01559Q495D7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01559Q495D7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 AL671710.1-201ENST00000610245 2349 ntBASIC12.37□□□□□ -0.43
LINC01559Q495D7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 HYMAI-201ENST00000635591 3347 ntBASIC12.37□□□□□ -0.43
LINC01559Q495D7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 POU5F1P6-201ENST00000466990 990 ntBASIC12.37□□□□□ -0.43
LINC01559Q495D7 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 LINC01238-205ENST00000567549 1107 ntBASIC12.37□□□□□ -0.43
LINC01559Q495D7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 AC017037.4-201ENST00000624526 826 ntBASIC12.37□□□□□ -0.43
LINC01559Q495D7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 SNX33P1-201ENST00000592116 1762 ntBASIC12.37□□□□□ -0.43
LINC01559Q495D7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01559Q495D7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01559Q495D7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01559Q495D7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01559Q495D7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LINC01559Q495D7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01559Q495D7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.36□□□□□ -0.43
LINC01559Q495D7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01559Q495D7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms