Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 FAM207CP-201ENST00000443486 507 ntBASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 AL512638.1-201ENST00000457493 794 ntBASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 AL138918.1-201ENST00000568306 659 ntBASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 MIR4453-201ENST00000584019 89 ntBASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 AC008761.3-201ENST00000624803 892 ntBASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 AP001350.2-201ENST00000625104 1094 ntBASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 AL391256.1-201ENST00000443260 1855 ntBASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC144BQ3MJ40 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 AC005034.1-201ENST00000426657 489 ntBASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 AC092580.3-201ENST00000430932 139 ntBASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 MPDU1-223ENST00000582151 728 ntBASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 AL035252.4-201ENST00000624174 288 ntBASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC144BQ3MJ40 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms