Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 AC002347.1-201ENST00000569543 541 ntBASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF3Q3KNV8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 HCG4B-203ENST00000450128 991 ntBASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF3Q3KNV8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 AL136379.1-201ENST00000623471 2642 ntBASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 AC002310.6-201ENST00000624451 1377 ntBASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCGF3Q3KNV8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms