Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.23■□□□□ 0.03
RFX4Q33E94 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.23■□□□□ 0.03
RFX4Q33E94 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.23■□□□□ 0.03
RFX4Q33E94 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RFX4Q33E94 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX4Q33E94 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
RFX4Q33E94 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RFX4Q33E94 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RFX4Q33E94 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RFX4Q33E94 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
RFX4Q33E94 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.22■□□□□ 0.03
RFX4Q33E94 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.22■□□□□ 0.03
RFX4Q33E94 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 AC106795.1-205ENST00000512851 1056 ntBASIC15.22■□□□□ 0.03
RFX4Q33E94 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.22■□□□□ 0.03
RFX4Q33E94 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.22■□□□□ 0.03
RFX4Q33E94 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.22■□□□□ 0.03
RFX4Q33E94 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RFX4Q33E94 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.22■□□□□ 0.03
RFX4Q33E94 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.22■□□□□ 0.03
RFX4Q33E94 AL358472.4-201ENST00000633140 710 ntBASIC15.22■□□□□ 0.03
RFX4Q33E94 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RFX4Q33E94 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.22■□□□□ 0.03
RFX4Q33E94 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.22■□□□□ 0.03
RFX4Q33E94 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RFX4Q33E94 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
RFX4Q33E94 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.22■□□□□ 0.03
RFX4Q33E94 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.22■□□□□ 0.03
RFX4Q33E94 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.22■□□□□ 0.03
RFX4Q33E94 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.22■□□□□ 0.03
RFX4Q33E94 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX4Q33E94 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RFX4Q33E94 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RFX4Q33E94 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RFX4Q33E94 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.21■□□□□ 0.03
RFX4Q33E94 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.21■□□□□ 0.03
RFX4Q33E94 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RFX4Q33E94 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.21■□□□□ 0.03
RFX4Q33E94 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 KRT18P35-201ENST00000510488 1269 ntBASIC15.21■□□□□ 0.03
RFX4Q33E94 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 AL109954.1-202ENST00000564051 2148 ntBASIC15.21■□□□□ 0.03
RFX4Q33E94 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.21■□□□□ 0.03
RFX4Q33E94 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.21■□□□□ 0.03
RFX4Q33E94 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.21■□□□□ 0.03
RFX4Q33E94 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.21■□□□□ 0.03
RFX4Q33E94 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.21■□□□□ 0.03
RFX4Q33E94 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.21■□□□□ 0.03
RFX4Q33E94 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RFX4Q33E94 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.21■□□□□ 0.03
RFX4Q33E94 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RFX4Q33E94 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX4Q33E94 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
RFX4Q33E94 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.21■□□□□ 0.03
RFX4Q33E94 PCDHA3-202ENST00000532566 4594 ntBASIC15.21■□□□□ 0.03
RFX4Q33E94 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms