Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SREBF2Q12772 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.42■□□□□ 0.54
SREBF2Q12772 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SREBF2Q12772 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SREBF2Q12772 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SREBF2Q12772 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.41■□□□□ 0.54
SREBF2Q12772 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SREBF2Q12772 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SREBF2Q12772 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.41■□□□□ 0.54
SREBF2Q12772 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 AC006001.1-201ENST00000325130 474 ntBASIC18.41■□□□□ 0.54
SREBF2Q12772 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SREBF2Q12772 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.41■□□□□ 0.54
SREBF2Q12772 HINT2P1-201ENST00000419438 481 ntBASIC18.41■□□□□ 0.54
SREBF2Q12772 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.41■□□□□ 0.54
SREBF2Q12772 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.41■□□□□ 0.54
SREBF2Q12772 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.41■□□□□ 0.54
SREBF2Q12772 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.41■□□□□ 0.54
SREBF2Q12772 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SREBF2Q12772 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.41■□□□□ 0.54
SREBF2Q12772 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 AP006547.1-201ENST00000563435 692 ntBASIC18.41■□□□□ 0.54
SREBF2Q12772 AC025279.2-201ENST00000569730 653 ntBASIC18.41■□□□□ 0.54
SREBF2Q12772 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.41■□□□□ 0.54
SREBF2Q12772 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
SREBF2Q12772 AC005695.3-201ENST00000614522 232 ntBASIC18.41■□□□□ 0.54
SREBF2Q12772 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SREBF2Q12772 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
SREBF2Q12772 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.41■□□□□ 0.54
SREBF2Q12772 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SREBF2Q12772 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SREBF2Q12772 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SREBF2Q12772 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.4■□□□□ 0.54
SREBF2Q12772 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SREBF2Q12772 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.4■□□□□ 0.54
SREBF2Q12772 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SREBF2Q12772 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.4■□□□□ 0.54
SREBF2Q12772 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SREBF2Q12772 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
SREBF2Q12772 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SREBF2Q12772 FNTAP2-201ENST00000430308 634 ntBASIC18.4■□□□□ 0.54
SREBF2Q12772 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 BX284668.4-201ENST00000453917 508 ntBASIC18.4■□□□□ 0.54
SREBF2Q12772 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.4■□□□□ 0.54
SREBF2Q12772 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.4■□□□□ 0.54
SREBF2Q12772 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.4■□□□□ 0.54
SREBF2Q12772 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.4■□□□□ 0.54
SREBF2Q12772 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.4■□□□□ 0.54
SREBF2Q12772 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.4■□□□□ 0.54
SREBF2Q12772 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SREBF2Q12772 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SREBF2Q12772 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.4■□□□□ 0.54
SREBF2Q12772 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 AC004408.2-201ENST00000623613 2777 ntBASIC18.4■□□□□ 0.54
SREBF2Q12772 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
SREBF2Q12772 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.4■□□□□ 0.54
SREBF2Q12772 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SREBF2Q12772 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.39■□□□□ 0.54
SREBF2Q12772 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.39■□□□□ 0.54
SREBF2Q12772 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SREBF2Q12772 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SREBF2Q12772 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SREBF2Q12772 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.39■□□□□ 0.53
SREBF2Q12772 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms