Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.24□□□□□ -0.13
HIST1H3AP68431 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 AC098859.1-201ENST00000502915 1238 ntBASIC14.24□□□□□ -0.13
HIST1H3AP68431 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 AC105233.2-201ENST00000523697 349 ntBASIC14.24□□□□□ -0.13
HIST1H3AP68431 FAM86C2P-203ENST00000528684 1004 ntBASIC14.24□□□□□ -0.13
HIST1H3AP68431 AF228730.5-201ENST00000530288 346 ntBASIC14.24□□□□□ -0.13
HIST1H3AP68431 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 FOXO1B-201ENST00000504678 1527 ntBASIC14.24□□□□□ -0.13
HIST1H3AP68431 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HIST1H3AP68431 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H3AP68431 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 AC010491.1-201ENST00000563101 2797 ntBASIC14.23□□□□□ -0.13
HIST1H3AP68431 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H3AP68431 AL022342.1-201ENST00000400363 863 ntBASIC14.23□□□□□ -0.13
HIST1H3AP68431 HAUS4P1-201ENST00000406739 1145 ntBASIC14.23□□□□□ -0.13
HIST1H3AP68431 TFAMP1-201ENST00000412727 736 ntBASIC14.23□□□□□ -0.13
HIST1H3AP68431 GPX1P2-201ENST00000429271 606 ntBASIC14.23□□□□□ -0.13
HIST1H3AP68431 FAM58CP-201ENST00000435741 640 ntBASIC14.23□□□□□ -0.13
HIST1H3AP68431 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.23□□□□□ -0.13
HIST1H3AP68431 AL135744.1-201ENST00000565098 629 ntBASIC14.23□□□□□ -0.13
HIST1H3AP68431 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms