Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.89■□□□□ 0.13
YBX1P67809 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.89■□□□□ 0.13
YBX1P67809 SPDYE11-202ENST00000450699 704 ntBASIC15.89■□□□□ 0.13
YBX1P67809 AC004967.1-201ENST00000453589 447 ntBASIC15.89■□□□□ 0.13
YBX1P67809 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
YBX1P67809 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
YBX1P67809 SPDYE9P-201ENST00000570642 692 ntBASIC15.89■□□□□ 0.13
YBX1P67809 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.89■□□□□ 0.13
YBX1P67809 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.89■□□□□ 0.13
YBX1P67809 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.89■□□□□ 0.13
YBX1P67809 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.89■□□□□ 0.13
YBX1P67809 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.89■□□□□ 0.13
YBX1P67809 SPDYE10P-202ENST00000612005 668 ntBASIC15.89■□□□□ 0.13
YBX1P67809 SPDYE8P-202ENST00000612377 668 ntBASIC15.89■□□□□ 0.13
YBX1P67809 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.89■□□□□ 0.13
YBX1P67809 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.89■□□□□ 0.13
YBX1P67809 AL513210.1-201ENST00000629608 234 ntBASIC15.89■□□□□ 0.13
YBX1P67809 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.89■□□□□ 0.13
YBX1P67809 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.89■□□□□ 0.13
YBX1P67809 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
YBX1P67809 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
YBX1P67809 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.89■□□□□ 0.13
YBX1P67809 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.89■□□□□ 0.13
YBX1P67809 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YBX1P67809 FOXO1B-201ENST00000504678 1527 ntBASIC15.89■□□□□ 0.13
YBX1P67809 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.89■□□□□ 0.13
YBX1P67809 REXO1L8P-201ENST00000604378 1897 ntBASIC15.88■□□□□ 0.13
YBX1P67809 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
YBX1P67809 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.88■□□□□ 0.13
YBX1P67809 AC126177.1-201ENST00000547829 2218 ntBASIC15.88■□□□□ 0.13
YBX1P67809 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.88■□□□□ 0.13
YBX1P67809 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
YBX1P67809 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
YBX1P67809 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
YBX1P67809 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.88■□□□□ 0.13
YBX1P67809 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 KRT18P34-201ENST00000488218 1270 ntBASIC15.88■□□□□ 0.13
YBX1P67809 AC069335.1-201ENST00000489972 472 ntBASIC15.88■□□□□ 0.13
YBX1P67809 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.88■□□□□ 0.13
YBX1P67809 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.88■□□□□ 0.13
YBX1P67809 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
YBX1P67809 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.88■□□□□ 0.13
YBX1P67809 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.88■□□□□ 0.13
YBX1P67809 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.88■□□□□ 0.13
YBX1P67809 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.88■□□□□ 0.13
YBX1P67809 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.88■□□□□ 0.13
YBX1P67809 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.88■□□□□ 0.13
YBX1P67809 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
YBX1P67809 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.88■□□□□ 0.13
YBX1P67809 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.88■□□□□ 0.13
YBX1P67809 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
YBX1P67809 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
YBX1P67809 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
YBX1P67809 AKAP8P1-201ENST00000434743 1349 ntBASIC15.88■□□□□ 0.13
YBX1P67809 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
YBX1P67809 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
YBX1P67809 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.88■□□□□ 0.13
YBX1P67809 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
YBX1P67809 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
YBX1P67809 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.88■□□□□ 0.13
YBX1P67809 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.87■□□□□ 0.13
YBX1P67809 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
YBX1P67809 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.87■□□□□ 0.13
YBX1P67809 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.87■□□□□ 0.13
YBX1P67809 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
YBX1P67809 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.87■□□□□ 0.13
YBX1P67809 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
YBX1P67809 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
YBX1P67809 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.87■□□□□ 0.13
YBX1P67809 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.87■□□□□ 0.13
YBX1P67809 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms