Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC079776.1-201ENST00000401540 1152 ntBASIC19.07■□□□□ 0.64
RHBDL3P58872 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.07■□□□□ 0.64
RHBDL3P58872 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RHBDL3P58872 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.07■□□□□ 0.64
RHBDL3P58872 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.07■□□□□ 0.64
RHBDL3P58872 RN7SL837P-201ENST00000463010 287 ntBASIC19.07■□□□□ 0.64
RHBDL3P58872 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.07■□□□□ 0.64
RHBDL3P58872 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.07■□□□□ 0.64
RHBDL3P58872 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RHBDL3P58872 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.07■□□□□ 0.64
RHBDL3P58872 WFDC1-204ENST00000613603 549 ntBASIC19.07■□□□□ 0.64
RHBDL3P58872 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.07■□□□□ 0.64
RHBDL3P58872 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.07■□□□□ 0.64
RHBDL3P58872 CDC14C-201ENST00000428251 1719 ntBASIC19.07■□□□□ 0.64
RHBDL3P58872 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RHBDL3P58872 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RHBDL3P58872 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RHBDL3P58872 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RHBDL3P58872 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.07■□□□□ 0.64
RHBDL3P58872 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RHBDL3P58872 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RHBDL3P58872 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.07■□□□□ 0.64
RHBDL3P58872 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
RHBDL3P58872 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.06■□□□□ 0.64
RHBDL3P58872 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.06■□□□□ 0.64
RHBDL3P58872 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RHBDL3P58872 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.06■□□□□ 0.64
RHBDL3P58872 TMEM261P1-201ENST00000604899 340 ntBASIC19.06■□□□□ 0.64
RHBDL3P58872 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
RHBDL3P58872 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.06■□□□□ 0.64
RHBDL3P58872 AC134407.2-201ENST00000625089 1978 ntBASIC19.06■□□□□ 0.64
RHBDL3P58872 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.06■□□□□ 0.64
RHBDL3P58872 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RHBDL3P58872 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.06■□□□□ 0.64
RHBDL3P58872 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RHBDL3P58872 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.06■□□□□ 0.64
RHBDL3P58872 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RHBDL3P58872 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.05■□□□□ 0.64
RHBDL3P58872 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.05■□□□□ 0.64
RHBDL3P58872 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.05■□□□□ 0.64
RHBDL3P58872 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RHBDL3P58872 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RHBDL3P58872 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.05■□□□□ 0.64
RHBDL3P58872 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.05■□□□□ 0.64
RHBDL3P58872 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.05■□□□□ 0.64
RHBDL3P58872 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.05■□□□□ 0.64
RHBDL3P58872 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.05■□□□□ 0.64
RHBDL3P58872 AL158212.4-201ENST00000624062 1286 ntBASIC19.05■□□□□ 0.64
RHBDL3P58872 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
RHBDL3P58872 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.05■□□□□ 0.64
RHBDL3P58872 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RHBDL3P58872 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RHBDL3P58872 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.04■□□□□ 0.64
RHBDL3P58872 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.04■□□□□ 0.64
RHBDL3P58872 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RHBDL3P58872 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RHBDL3P58872 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.04■□□□□ 0.64
RHBDL3P58872 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RHBDL3P58872 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.04■□□□□ 0.64
RHBDL3P58872 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.04■□□□□ 0.64
RHBDL3P58872 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.04■□□□□ 0.64
RHBDL3P58872 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RHBDL3P58872 AC011495.1-201ENST00000498085 584 ntBASIC19.04■□□□□ 0.64
RHBDL3P58872 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RHBDL3P58872 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.04■□□□□ 0.64
RHBDL3P58872 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms