Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN12P56749 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CLDN12P56749 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN12P56749 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN12P56749 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN12P56749 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN12P56749 AL031133.1-201ENST00000406807 723 ntBASIC14.24□□□□□ -0.13
CLDN12P56749 POM121L3P-201ENST00000419331 1163 ntBASIC14.24□□□□□ -0.13
CLDN12P56749 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CLDN12P56749 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN12P56749 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN12P56749 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN12P56749 RN7SL850P-201ENST00000579959 291 ntBASIC14.24□□□□□ -0.13
CLDN12P56749 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.24□□□□□ -0.13
CLDN12P56749 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN12P56749 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN12P56749 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN12P56749 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN12P56749 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN12P56749 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN12P56749 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
CLDN12P56749 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN12P56749 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN12P56749 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN12P56749 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN12P56749 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN12P56749 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN12P56749 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 MIR648-201ENST00000385046 94 ntBASIC14.23□□□□□ -0.13
CLDN12P56749 NUS1P2-201ENST00000417358 873 ntBASIC14.23□□□□□ -0.13
CLDN12P56749 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.23□□□□□ -0.13
CLDN12P56749 AP000867.3-201ENST00000524675 377 ntBASIC14.23□□□□□ -0.13
CLDN12P56749 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLDN12P56749 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 MIR5100-201ENST00000579544 119 ntBASIC14.23□□□□□ -0.13
CLDN12P56749 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN12P56749 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 AL121956.5-201ENST00000625261 221 ntBASIC14.23□□□□□ -0.13
CLDN12P56749 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN12P56749 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN12P56749 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN12P56749 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN12P56749 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN12P56749 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN12P56749 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLDN12P56749 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN12P56749 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN12P56749 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN12P56749 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN12P56749 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN12P56749 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CLDN12P56749 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CLDN12P56749 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN12P56749 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CLDN12P56749 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN12P56749 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN12P56749 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN12P56749 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN12P56749 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN12P56749 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CLDN12P56749 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN12P56749 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN12P56749 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms