Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL589702.1-201ENST00000641229 1509 ntBASIC15.59■□□□□ 0.09
CLDN6P56747 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN6P56747 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN6P56747 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN6P56747 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.59■□□□□ 0.09
CLDN6P56747 AL138688.1-201ENST00000624851 1594 ntBASIC15.59■□□□□ 0.09
CLDN6P56747 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
CLDN6P56747 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLDN6P56747 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.59■□□□□ 0.09
CLDN6P56747 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN6P56747 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN6P56747 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN6P56747 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN6P56747 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CLDN6P56747 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.59■□□□□ 0.09
CLDN6P56747 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN6P56747 AC093726.1-201ENST00000608064 963 ntBASIC15.59■□□□□ 0.09
CLDN6P56747 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN6P56747 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CLDN6P56747 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN6P56747 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN6P56747 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN6P56747 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN6P56747 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN6P56747 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN6P56747 CLK3P2-201ENST00000427566 1453 ntBASIC15.59■□□□□ 0.09
CLDN6P56747 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN6P56747 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.58■□□□□ 0.09
CLDN6P56747 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN6P56747 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN6P56747 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN6P56747 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN6P56747 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN6P56747 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN6P56747 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN6P56747 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CLDN6P56747 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN6P56747 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLDN6P56747 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN6P56747 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN6P56747 AC007389.4-201ENST00000454674 793 ntBASIC15.58■□□□□ 0.08
CLDN6P56747 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN6P56747 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CLDN6P56747 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN6P56747 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLDN6P56747 AC013467.2-201ENST00000605472 835 ntBASIC15.58■□□□□ 0.08
CLDN6P56747 AC099568.2-201ENST00000609194 695 ntBASIC15.58■□□□□ 0.08
CLDN6P56747 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN6P56747 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN6P56747 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN6P56747 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN6P56747 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CLDN6P56747 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN6P56747 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLDN6P56747 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN6P56747 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLDN6P56747 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLDN6P56747 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CLDN6P56747 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CLDN6P56747 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CLDN6P56747 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN6P56747 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN6P56747 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CLDN6P56747 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN6P56747 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CLDN6P56747 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN6P56747 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN6P56747 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN6P56747 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN6P56747 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN6P56747 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN6P56747 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN6P56747 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN6P56747 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN6P56747 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.57■□□□□ 0.08
CLDN6P56747 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN6P56747 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CLDN6P56747 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN6P56747 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN6P56747 RPSAP52-203ENST00000622976 1023 ntBASIC15.57■□□□□ 0.08
CLDN6P56747 AL033527.5-201ENST00000641382 801 ntBASIC15.57■□□□□ 0.08
CLDN6P56747 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN6P56747 TUBB8P12-201ENST00000308911 1335 ntBASIC15.57■□□□□ 0.08
CLDN6P56747 TUBB7P-202ENST00000428444 1305 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms