Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.18■□□□□ 0.02
PER3P56645 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PER3P56645 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PER3P56645 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
PER3P56645 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.17■□□□□ 0.02
PER3P56645 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
PER3P56645 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PER3P56645 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 AL138688.1-201ENST00000624851 1594 ntBASIC15.17■□□□□ 0.02
PER3P56645 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
PER3P56645 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.17■□□□□ 0.02
PER3P56645 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.17■□□□□ 0.02
PER3P56645 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PER3P56645 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.17■□□□□ 0.02
PER3P56645 SLC25A39P2-201ENST00000537614 270 ntBASIC15.17■□□□□ 0.02
PER3P56645 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.17■□□□□ 0.02
PER3P56645 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.17■□□□□ 0.02
PER3P56645 AL158211.3-201ENST00000607385 239 ntBASIC15.17■□□□□ 0.02
PER3P56645 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.17■□□□□ 0.02
PER3P56645 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.17■□□□□ 0.02
PER3P56645 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PER3P56645 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PER3P56645 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.17■□□□□ 0.02
PER3P56645 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PER3P56645 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.17■□□□□ 0.02
PER3P56645 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.17■□□□□ 0.02
PER3P56645 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.17■□□□□ 0.02
PER3P56645 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PER3P56645 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.16■□□□□ 0.02
PER3P56645 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.16■□□□□ 0.02
PER3P56645 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.16■□□□□ 0.02
PER3P56645 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 AC007326.2-201ENST00000624224 7579 ntBASIC15.16■□□□□ 0.02
PER3P56645 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.16■□□□□ 0.02
PER3P56645 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PER3P56645 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
PER3P56645 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.16■□□□□ 0.02
PER3P56645 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.16■□□□□ 0.02
PER3P56645 HLA-J-202ENST00000469281 1241 ntBASIC15.16■□□□□ 0.02
PER3P56645 SLC25A6P2-201ENST00000497974 877 ntBASIC15.16■□□□□ 0.02
PER3P56645 AC069120.2-201ENST00000524091 540 ntBASIC15.16■□□□□ 0.02
PER3P56645 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.16■□□□□ 0.02
PER3P56645 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.16■□□□□ 0.02
PER3P56645 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.16■□□□□ 0.02
PER3P56645 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.16■□□□□ 0.02
PER3P56645 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.16■□□□□ 0.02
PER3P56645 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.16■□□□□ 0.02
PER3P56645 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PER3P56645 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PER3P56645 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PER3P56645 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms