Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 AC016027.1-202ENST00000607927 1699 ntBASIC15.22■□□□□ 0.03
PSMD4P55036 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.22■□□□□ 0.03
PSMD4P55036 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PSMD4P55036 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PSMD4P55036 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PSMD4P55036 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.22■□□□□ 0.03
PSMD4P55036 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PSMD4P55036 YBX2P1-201ENST00000394192 760 ntBASIC15.22■□□□□ 0.03
PSMD4P55036 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
PSMD4P55036 MIR3687-2-201ENST00000577708 61 ntBASIC15.22■□□□□ 0.03
PSMD4P55036 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.22■□□□□ 0.03
PSMD4P55036 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.22■□□□□ 0.03
PSMD4P55036 MIR3687-1-201ENST00000614492 61 ntBASIC15.22■□□□□ 0.03
PSMD4P55036 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.22■□□□□ 0.03
PSMD4P55036 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PSMD4P55036 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.22■□□□□ 0.03
PSMD4P55036 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
PSMD4P55036 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PSMD4P55036 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 DOC2GP-204ENST00000639052 2548 ntBASIC15.21■□□□□ 0.03
PSMD4P55036 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PSMD4P55036 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PSMD4P55036 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.21■□□□□ 0.03
PSMD4P55036 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.21■□□□□ 0.03
PSMD4P55036 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.21■□□□□ 0.03
PSMD4P55036 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.21■□□□□ 0.03
PSMD4P55036 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PSMD4P55036 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.21■□□□□ 0.03
PSMD4P55036 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.21■□□□□ 0.03
PSMD4P55036 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.21■□□□□ 0.03
PSMD4P55036 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.21■□□□□ 0.03
PSMD4P55036 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.21■□□□□ 0.03
PSMD4P55036 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PSMD4P55036 AL671883.3-201ENST00000603274 991 ntBASIC15.21■□□□□ 0.03
PSMD4P55036 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PSMD4P55036 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.21■□□□□ 0.02
PSMD4P55036 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.21■□□□□ 0.02
PSMD4P55036 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
PSMD4P55036 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
PSMD4P55036 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
PSMD4P55036 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PSMD4P55036 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PSMD4P55036 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PSMD4P55036 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PSMD4P55036 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.2■□□□□ 0.02
PSMD4P55036 AC006449.6-201ENST00000612330 2296 ntBASIC15.2■□□□□ 0.02
PSMD4P55036 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms