Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.94■□□□□ 0.3
EPHB3P54753 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
EPHB3P54753 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.94■□□□□ 0.3
EPHB3P54753 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.94■□□□□ 0.3
EPHB3P54753 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
EPHB3P54753 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
EPHB3P54753 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
EPHB3P54753 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
EPHB3P54753 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.93■□□□□ 0.3
EPHB3P54753 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.93■□□□□ 0.3
EPHB3P54753 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.93■□□□□ 0.3
EPHB3P54753 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.93■□□□□ 0.3
EPHB3P54753 SPDYE18-201ENST00000510091 1050 ntBASIC16.93■□□□□ 0.3
EPHB3P54753 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.93■□□□□ 0.3
EPHB3P54753 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.93■□□□□ 0.3
EPHB3P54753 TPRX2P-201ENST00000535362 881 ntBASIC16.93■□□□□ 0.3
EPHB3P54753 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.93■□□□□ 0.3
EPHB3P54753 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.93■□□□□ 0.3
EPHB3P54753 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHB3P54753 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.93■□□□□ 0.3
EPHB3P54753 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
EPHB3P54753 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHB3P54753 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.93■□□□□ 0.3
EPHB3P54753 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
EPHB3P54753 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.93■□□□□ 0.3
EPHB3P54753 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.93■□□□□ 0.3
EPHB3P54753 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
EPHB3P54753 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
EPHB3P54753 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHB3P54753 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB3P54753 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHB3P54753 AC138969.3-201ENST00000546612 1459 ntBASIC16.93■□□□□ 0.3
EPHB3P54753 AC138932.2-201ENST00000548268 1459 ntBASIC16.93■□□□□ 0.3
EPHB3P54753 AC126755.4-201ENST00000549796 1459 ntBASIC16.93■□□□□ 0.3
EPHB3P54753 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB3P54753 AL592424.1-201ENST00000563624 1536 ntBASIC16.92■□□□□ 0.3
EPHB3P54753 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
EPHB3P54753 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 AC012313.1-201ENST00000593393 3059 ntBASIC16.92■□□□□ 0.3
EPHB3P54753 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB3P54753 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
EPHB3P54753 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
EPHB3P54753 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB3P54753 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB3P54753 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.92■□□□□ 0.3
EPHB3P54753 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB3P54753 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB3P54753 AC055876.2-201ENST00000531834 546 ntBASIC16.92■□□□□ 0.3
EPHB3P54753 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.92■□□□□ 0.3
EPHB3P54753 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB3P54753 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
EPHB3P54753 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB3P54753 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB3P54753 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHB3P54753 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms