Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ZNF140P52738 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ZNF140P52738 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF140P52738 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF140P52738 AC004967.1-201ENST00000453589 447 ntBASIC16.18■□□□□ 0.18
ZNF140P52738 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF140P52738 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF140P52738 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF140P52738 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.18■□□□□ 0.18
ZNF140P52738 RARRES2P9-201ENST00000565168 469 ntBASIC16.18■□□□□ 0.18
ZNF140P52738 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF140P52738 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.18■□□□□ 0.18
ZNF140P52738 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF140P52738 AC009093.7-201ENST00000623853 1223 ntBASIC16.18■□□□□ 0.18
ZNF140P52738 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF140P52738 AC007950.2-201ENST00000615045 2347 ntBASIC16.18■□□□□ 0.18
ZNF140P52738 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF140P52738 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF140P52738 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
ZNF140P52738 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ZNF140P52738 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ZNF140P52738 AP001282.1-201ENST00000531301 1499 ntBASIC16.17■□□□□ 0.18
ZNF140P52738 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF140P52738 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF140P52738 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ZNF140P52738 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF140P52738 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
ZNF140P52738 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ZNF140P52738 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF140P52738 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF140P52738 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
ZNF140P52738 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ZNF140P52738 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ZNF140P52738 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.17■□□□□ 0.18
ZNF140P52738 AC254562.1-201ENST00000417586 456 ntBASIC16.17■□□□□ 0.18
ZNF140P52738 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.17■□□□□ 0.18
ZNF140P52738 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.17■□□□□ 0.18
ZNF140P52738 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
ZNF140P52738 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF140P52738 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF140P52738 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF140P52738 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF140P52738 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF140P52738 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ZNF140P52738 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF140P52738 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF140P52738 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF140P52738 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF140P52738 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF140P52738 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF140P52738 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF140P52738 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
ZNF140P52738 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF140P52738 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
ZNF140P52738 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF140P52738 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF140P52738 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 MIR1233-2-201ENST00000408138 82 ntBASIC16.16■□□□□ 0.18
ZNF140P52738 MIR1233-1-201ENST00000408722 82 ntBASIC16.16■□□□□ 0.18
ZNF140P52738 CNN2P11-201ENST00000429351 262 ntBASIC16.16■□□□□ 0.18
ZNF140P52738 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF140P52738 AC023141.5-201ENST00000458585 616 ntBASIC16.16■□□□□ 0.18
ZNF140P52738 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.16■□□□□ 0.18
ZNF140P52738 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF140P52738 ALG1L8P-201ENST00000533887 760 ntBASIC16.16■□□□□ 0.18
ZNF140P52738 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.16■□□□□ 0.18
ZNF140P52738 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ZNF140P52738 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF140P52738 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 AC008894.3-201ENST00000624324 3103 ntBASIC16.16■□□□□ 0.18
ZNF140P52738 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF140P52738 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF140P52738 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF140P52738 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms