Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCR9P51686 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCR9P51686 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCR9P51686 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.41□□□□□ -0.1
CCR9P51686 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCR9P51686 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCR9P51686 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCR9P51686 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCR9P51686 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CCR9P51686 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCR9P51686 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCR9P51686 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCR9P51686 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCR9P51686 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCR9P51686 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCR9P51686 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.41□□□□□ -0.1
CCR9P51686 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.41□□□□□ -0.1
CCR9P51686 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCR9P51686 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCR9P51686 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.41□□□□□ -0.1
CCR9P51686 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCR9P51686 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.4□□□□□ -0.1
CCR9P51686 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.4□□□□□ -0.1
CCR9P51686 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.4□□□□□ -0.1
CCR9P51686 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CCR9P51686 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.4□□□□□ -0.1
CCR9P51686 TSPY19P-201ENST00000418461 509 ntBASIC14.4□□□□□ -0.1
CCR9P51686 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCR9P51686 TSPY18P-201ENST00000441642 509 ntBASIC14.4□□□□□ -0.1
CCR9P51686 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.4□□□□□ -0.1
CCR9P51686 AC021087.4-201ENST00000563761 564 ntBASIC14.4□□□□□ -0.1
CCR9P51686 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.4□□□□□ -0.1
CCR9P51686 AC008667.4-201ENST00000607370 168 ntBASIC14.4□□□□□ -0.1
CCR9P51686 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.4□□□□□ -0.1
CCR9P51686 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.4□□□□□ -0.1
CCR9P51686 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 AC093458.2-201ENST00000623150 629 ntBASIC14.4□□□□□ -0.1
CCR9P51686 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCR9P51686 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.4□□□□□ -0.1
CCR9P51686 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCR9P51686 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.4□□□□□ -0.1
CCR9P51686 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.4□□□□□ -0.1
CCR9P51686 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCR9P51686 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.4□□□□□ -0.1
CCR9P51686 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCR9P51686 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCR9P51686 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.39□□□□□ -0.11
CCR9P51686 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.39□□□□□ -0.11
CCR9P51686 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
CCR9P51686 AC073621.1-201ENST00000392730 636 ntBASIC14.39□□□□□ -0.11
CCR9P51686 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.39□□□□□ -0.11
CCR9P51686 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.39□□□□□ -0.11
CCR9P51686 AC136632.2-201ENST00000512891 861 ntBASIC14.39□□□□□ -0.11
CCR9P51686 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.39□□□□□ -0.11
CCR9P51686 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.39□□□□□ -0.11
CCR9P51686 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CCR9P51686 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 AC067930.6-201ENST00000623257 4947 ntBASIC14.39□□□□□ -0.11
CCR9P51686 AC012569.1-201ENST00000591191 1524 ntBASIC14.39□□□□□ -0.11
CCR9P51686 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCR9P51686 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 AC016027.1-202ENST00000607927 1699 ntBASIC14.39□□□□□ -0.11
CCR9P51686 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCR9P51686 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CCR9P51686 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCR9P51686 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCR9P51686 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.38□□□□□ -0.11
CCR9P51686 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCR9P51686 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.38□□□□□ -0.11
CCR9P51686 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms