Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 AC120114.3-201ENST00000611923 658 ntBASIC16.53■□□□□ 0.24
GRIA1P42261 BX640515.1-201ENST00000617215 977 ntBASIC16.53■□□□□ 0.24
GRIA1P42261 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GRIA1P42261 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GRIA1P42261 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.53■□□□□ 0.24
GRIA1P42261 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GRIA1P42261 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GRIA1P42261 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GRIA1P42261 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GRIA1P42261 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GRIA1P42261 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GRIA1P42261 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.53■□□□□ 0.24
GRIA1P42261 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GRIA1P42261 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GRIA1P42261 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GRIA1P42261 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.52■□□□□ 0.24
GRIA1P42261 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GRIA1P42261 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GRIA1P42261 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.52■□□□□ 0.24
GRIA1P42261 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.52■□□□□ 0.24
GRIA1P42261 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GRIA1P42261 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.52■□□□□ 0.24
GRIA1P42261 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
GRIA1P42261 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GRIA1P42261 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
GRIA1P42261 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GRIA1P42261 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GRIA1P42261 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GRIA1P42261 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GRIA1P42261 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
GRIA1P42261 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.52■□□□□ 0.24
GRIA1P42261 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.52■□□□□ 0.24
GRIA1P42261 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.52■□□□□ 0.24
GRIA1P42261 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.52■□□□□ 0.24
GRIA1P42261 AC106730.1-201ENST00000566722 1090 ntBASIC16.52■□□□□ 0.24
GRIA1P42261 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.52■□□□□ 0.24
GRIA1P42261 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.52■□□□□ 0.24
GRIA1P42261 AC068137.2-201ENST00000605408 478 ntBASIC16.52■□□□□ 0.24
GRIA1P42261 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.52■□□□□ 0.24
GRIA1P42261 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.52■□□□□ 0.24
GRIA1P42261 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GRIA1P42261 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GRIA1P42261 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
GRIA1P42261 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.52■□□□□ 0.24
GRIA1P42261 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GRIA1P42261 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GRIA1P42261 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GRIA1P42261 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
GRIA1P42261 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
GRIA1P42261 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
GRIA1P42261 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GRIA1P42261 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.52■□□□□ 0.23
GRIA1P42261 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GRIA1P42261 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GRIA1P42261 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
GRIA1P42261 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.51■□□□□ 0.23
GRIA1P42261 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.51■□□□□ 0.23
GRIA1P42261 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GRIA1P42261 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.51■□□□□ 0.23
GRIA1P42261 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.51■□□□□ 0.23
GRIA1P42261 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.51■□□□□ 0.23
GRIA1P42261 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
GRIA1P42261 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GRIA1P42261 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.51■□□□□ 0.23
GRIA1P42261 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.51■□□□□ 0.23
GRIA1P42261 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.51■□□□□ 0.23
GRIA1P42261 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.51■□□□□ 0.23
GRIA1P42261 AL138918.1-201ENST00000568306 659 ntBASIC16.51■□□□□ 0.23
GRIA1P42261 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
GRIA1P42261 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.51■□□□□ 0.23
GRIA1P42261 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.51■□□□□ 0.23
GRIA1P42261 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.51■□□□□ 0.23
GRIA1P42261 AC099522.2-201ENST00000607001 744 ntBASIC16.51■□□□□ 0.23
GRIA1P42261 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.51■□□□□ 0.23
GRIA1P42261 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
GRIA1P42261 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GRIA1P42261 ZNF259P1-201ENST00000407656 1365 ntBASIC16.51■□□□□ 0.23
GRIA1P42261 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.51■□□□□ 0.23
GRIA1P42261 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms