Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.14■□□□□ 0.01
LCN1P31025 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 AL355306.1-201ENST00000415580 579 ntBASIC15.14■□□□□ 0.01
LCN1P31025 FAM58CP-201ENST00000435741 640 ntBASIC15.14■□□□□ 0.01
LCN1P31025 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 AC073389.1-201ENST00000595595 795 ntBASIC15.14■□□□□ 0.01
LCN1P31025 AL671883.3-201ENST00000603274 991 ntBASIC15.14■□□□□ 0.01
LCN1P31025 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.14■□□□□ 0.01
LCN1P31025 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 AC005622.1-201ENST00000636801 1703 ntBASIC15.14■□□□□ 0.01
LCN1P31025 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P31025 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P31025 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LCN1P31025 FLJ16779-201ENST00000612722 7638 ntBASIC15.13■□□□□ 0.01
LCN1P31025 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LCN1P31025 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LCN1P31025 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 AL592424.1-201ENST00000563624 1536 ntBASIC15.13■□□□□ 0.01
LCN1P31025 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.13■□□□□ 0.01
LCN1P31025 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LCN1P31025 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LCN1P31025 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 YBX2P1-201ENST00000394192 760 ntBASIC15.13■□□□□ 0.01
LCN1P31025 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
LCN1P31025 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LCN1P31025 AL671277.1-201ENST00000429656 993 ntBASIC15.13■□□□□ 0.01
LCN1P31025 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.13■□□□□ 0.01
LCN1P31025 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.13■□□□□ 0.01
LCN1P31025 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.13■□□□□ 0.01
LCN1P31025 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.13■□□□□ 0.01
LCN1P31025 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LCN1P31025 AL365330.1-201ENST00000607459 531 ntBASIC15.13■□□□□ 0.01
LCN1P31025 AC005052.1-201ENST00000625181 2492 ntBASIC15.13■□□□□ 0.01
LCN1P31025 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.13■□□□□ 0.01
LCN1P31025 AC092902.6-201ENST00000641783 218 ntBASIC15.13■□□□□ 0.01
LCN1P31025 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P31025 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LCN1P31025 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LCN1P31025 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
LCN1P31025 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCN1P31025 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.12■□□□□ 0.01
LCN1P31025 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms