Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TM4SF1P30408 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.94■□□□□ 0.78
TM4SF1P30408 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.94■□□□□ 0.78
TM4SF1P30408 CNN2P8-201ENST00000421872 913 ntBASIC19.94■□□□□ 0.78
TM4SF1P30408 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.94■□□□□ 0.78
TM4SF1P30408 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TM4SF1P30408 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TM4SF1P30408 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TM4SF1P30408 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TM4SF1P30408 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
TM4SF1P30408 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.94■□□□□ 0.78
TM4SF1P30408 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.94■□□□□ 0.78
TM4SF1P30408 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.94■□□□□ 0.78
TM4SF1P30408 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF1P30408 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.94■□□□□ 0.78
TM4SF1P30408 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.93■□□□□ 0.78
TM4SF1P30408 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.93■□□□□ 0.78
TM4SF1P30408 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TM4SF1P30408 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
TM4SF1P30408 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.93■□□□□ 0.78
TM4SF1P30408 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TM4SF1P30408 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TM4SF1P30408 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TM4SF1P30408 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.93■□□□□ 0.78
TM4SF1P30408 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.93■□□□□ 0.78
TM4SF1P30408 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.93■□□□□ 0.78
TM4SF1P30408 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.93■□□□□ 0.78
TM4SF1P30408 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.93■□□□□ 0.78
TM4SF1P30408 RHOQP1-201ENST00000555758 579 ntBASIC19.93■□□□□ 0.78
TM4SF1P30408 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.93■□□□□ 0.78
TM4SF1P30408 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.93■□□□□ 0.78
TM4SF1P30408 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.93■□□□□ 0.78
TM4SF1P30408 AL118558.3-201ENST00000607414 1079 ntBASIC19.93■□□□□ 0.78
TM4SF1P30408 AC091271.1-201ENST00000611877 1162 ntBASIC19.93■□□□□ 0.78
TM4SF1P30408 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.93■□□□□ 0.78
TM4SF1P30408 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.93■□□□□ 0.78
TM4SF1P30408 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM4SF1P30408 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
TM4SF1P30408 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TM4SF1P30408 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.92■□□□□ 0.78
TM4SF1P30408 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
TM4SF1P30408 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TM4SF1P30408 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.92■□□□□ 0.78
TM4SF1P30408 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.92■□□□□ 0.78
TM4SF1P30408 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.92■□□□□ 0.78
TM4SF1P30408 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.92■□□□□ 0.78
TM4SF1P30408 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.92■□□□□ 0.78
TM4SF1P30408 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.92■□□□□ 0.78
TM4SF1P30408 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.92■□□□□ 0.78
TM4SF1P30408 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.92■□□□□ 0.78
TM4SF1P30408 FAM86HP-204ENST00000513466 959 ntBASIC19.92■□□□□ 0.78
TM4SF1P30408 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.92■□□□□ 0.78
TM4SF1P30408 AP001094.4-201ENST00000579008 2176 ntBASIC19.92■□□□□ 0.78
TM4SF1P30408 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.92■□□□□ 0.78
TM4SF1P30408 REXO1L8P-201ENST00000604378 1897 ntBASIC19.92■□□□□ 0.78
TM4SF1P30408 AC078925.2-201ENST00000624013 1973 ntBASIC19.92■□□□□ 0.78
TM4SF1P30408 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM4SF1P30408 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM4SF1P30408 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms