Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
XPAP23025 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XPAP23025 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.45■□□□□ 0.22
XPAP23025 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XPAP23025 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XPAP23025 AL353705.2-201ENST00000428243 662 ntBASIC16.45■□□□□ 0.22
XPAP23025 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.45■□□□□ 0.22
XPAP23025 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.45■□□□□ 0.22
XPAP23025 KLF2P3-201ENST00000451977 1087 ntBASIC16.45■□□□□ 0.22
XPAP23025 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.45■□□□□ 0.22
XPAP23025 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.45■□□□□ 0.22
XPAP23025 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.45■□□□□ 0.22
XPAP23025 AL355385.1-201ENST00000606123 409 ntBASIC16.45■□□□□ 0.22
XPAP23025 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
XPAP23025 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XPAP23025 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
XPAP23025 AC008677.1-201ENST00000519230 1561 ntBASIC16.45■□□□□ 0.22
XPAP23025 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XPAP23025 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XPAP23025 U82695.1-201ENST00000635752 1889 ntBASIC16.45■□□□□ 0.22
XPAP23025 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.45■□□□□ 0.22
XPAP23025 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
XPAP23025 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XPAP23025 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XPAP23025 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
XPAP23025 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
XPAP23025 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XPAP23025 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XPAP23025 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
XPAP23025 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
XPAP23025 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
XPAP23025 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
XPAP23025 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.44■□□□□ 0.22
XPAP23025 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
XPAP23025 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.44■□□□□ 0.22
XPAP23025 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
XPAP23025 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.44■□□□□ 0.22
XPAP23025 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
XPAP23025 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 FAM220BP-201ENST00000377689 816 ntBASIC16.44■□□□□ 0.22
XPAP23025 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.44■□□□□ 0.22
XPAP23025 AC107890.1-201ENST00000422478 521 ntBASIC16.44■□□□□ 0.22
XPAP23025 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.44■□□□□ 0.22
XPAP23025 POU5F1P6-201ENST00000466990 990 ntBASIC16.44■□□□□ 0.22
XPAP23025 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.44■□□□□ 0.22
XPAP23025 MIR4453-201ENST00000584019 89 ntBASIC16.44■□□□□ 0.22
XPAP23025 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.44■□□□□ 0.22
XPAP23025 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.44■□□□□ 0.22
XPAP23025 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.44■□□□□ 0.22
XPAP23025 FLJ38576-201ENST00000623820 2459 ntBASIC16.44■□□□□ 0.22
XPAP23025 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.44■□□□□ 0.22
XPAP23025 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.44■□□□□ 0.22
XPAP23025 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.44■□□□□ 0.22
XPAP23025 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.44■□□□□ 0.22
XPAP23025 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
XPAP23025 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.44■□□□□ 0.22
XPAP23025 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.44■□□□□ 0.22
XPAP23025 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.44■□□□□ 0.22
XPAP23025 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
XPAP23025 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
XPAP23025 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
XPAP23025 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
XPAP23025 AC011676.5-201ENST00000624864 2660 ntBASIC16.43■□□□□ 0.22
XPAP23025 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
XPAP23025 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XPAP23025 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
XPAP23025 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XPAP23025 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.43■□□□□ 0.22
XPAP23025 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XPAP23025 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
XPAP23025 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XPAP23025 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XPAP23025 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XPAP23025 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.43■□□□□ 0.22
XPAP23025 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
XPAP23025 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
XPAP23025 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XPAP23025 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XPAP23025 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XPAP23025 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.43■□□□□ 0.22
XPAP23025 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
XPAP23025 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XPAP23025 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.43■□□□□ 0.22
XPAP23025 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.43■□□□□ 0.22
XPAP23025 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.43■□□□□ 0.22
XPAP23025 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.43■□□□□ 0.22
XPAP23025 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.43■□□□□ 0.22
XPAP23025 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.43■□□□□ 0.22
XPAP23025 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms