Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USF1P22415 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USF1P22415 AC142381.1-201ENST00000426099 345 ntBASIC13.84□□□□□ -0.19
USF1P22415 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USF1P22415 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.84□□□□□ -0.19
USF1P22415 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.84□□□□□ -0.19
USF1P22415 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.84□□□□□ -0.19
USF1P22415 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.84□□□□□ -0.19
USF1P22415 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.84□□□□□ -0.19
USF1P22415 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.84□□□□□ -0.19
USF1P22415 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.84□□□□□ -0.19
USF1P22415 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.84□□□□□ -0.19
USF1P22415 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USF1P22415 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.84□□□□□ -0.19
USF1P22415 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.84□□□□□ -0.19
USF1P22415 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
USF1P22415 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
USF1P22415 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.84□□□□□ -0.19
USF1P22415 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USF1P22415 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USF1P22415 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USF1P22415 FRMD8P1-201ENST00000440433 1524 ntBASIC13.84□□□□□ -0.19
USF1P22415 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.84□□□□□ -0.19
USF1P22415 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.84□□□□□ -0.19
USF1P22415 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USF1P22415 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.84□□□□□ -0.19
USF1P22415 AC092053.1-201ENST00000605787 1936 ntBASIC13.84□□□□□ -0.19
USF1P22415 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USF1P22415 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
USF1P22415 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
USF1P22415 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
USF1P22415 AP3S2-216ENST00000617003 1561 ntBASIC13.83□□□□□ -0.19
USF1P22415 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
USF1P22415 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
USF1P22415 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
USF1P22415 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
USF1P22415 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.83□□□□□ -0.19
USF1P22415 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
USF1P22415 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
USF1P22415 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 AC100757.3-201ENST00000622361 1406 ntBASIC13.83□□□□□ -0.2
USF1P22415 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
USF1P22415 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
USF1P22415 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
USF1P22415 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.83□□□□□ -0.2
USF1P22415 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.83□□□□□ -0.2
USF1P22415 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.83□□□□□ -0.2
USF1P22415 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
USF1P22415 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
USF1P22415 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.83□□□□□ -0.2
USF1P22415 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.83□□□□□ -0.2
USF1P22415 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.83□□□□□ -0.2
USF1P22415 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.83□□□□□ -0.2
USF1P22415 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.83□□□□□ -0.2
USF1P22415 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.83□□□□□ -0.2
USF1P22415 CRB3P1-201ENST00000449338 276 ntBASIC13.83□□□□□ -0.2
USF1P22415 GAPDHP21-201ENST00000450301 1010 ntBASIC13.83□□□□□ -0.2
USF1P22415 AC004890.2-204ENST00000481968 304 ntBASIC13.83□□□□□ -0.2
USF1P22415 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
USF1P22415 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.83□□□□□ -0.2
USF1P22415 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.83□□□□□ -0.2
USF1P22415 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.83□□□□□ -0.2
USF1P22415 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.83□□□□□ -0.2
USF1P22415 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
USF1P22415 AC007967.4-201ENST00000614700 386 ntBASIC13.83□□□□□ -0.2
USF1P22415 AL590560.3-201ENST00000623350 461 ntBASIC13.83□□□□□ -0.2
USF1P22415 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.83□□□□□ -0.2
USF1P22415 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.83□□□□□ -0.2
USF1P22415 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.83□□□□□ -0.2
USF1P22415 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.83□□□□□ -0.2
USF1P22415 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.83□□□□□ -0.2
USF1P22415 AC005915.1-201ENST00000624912 2018 ntBASIC13.83□□□□□ -0.2
USF1P22415 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.83□□□□□ -0.2
USF1P22415 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
USF1P22415 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
USF1P22415 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.83□□□□□ -0.2
USF1P22415 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USF1P22415 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
USF1P22415 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.82□□□□□ -0.2
USF1P22415 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
USF1P22415 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms