Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH3P22223 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 TCAF2P1-201ENST00000291129 2421 ntBASIC16.05■□□□□ 0.16
CDH3P22223 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CDH3P22223 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDH3P22223 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH3P22223 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CDH3P22223 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 AL592309.1-201ENST00000443127 649 ntBASIC16.05■□□□□ 0.16
CDH3P22223 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH3P22223 AC079140.1-201ENST00000508039 487 ntBASIC16.05■□□□□ 0.16
CDH3P22223 IGHV3-62-201ENST00000520057 340 ntBASIC16.05■□□□□ 0.16
CDH3P22223 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH3P22223 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.05■□□□□ 0.16
CDH3P22223 AC027612.4-201ENST00000605371 583 ntBASIC16.05■□□□□ 0.16
CDH3P22223 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH3P22223 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDH3P22223 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
CDH3P22223 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CDH3P22223 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH3P22223 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH3P22223 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDH3P22223 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CDH3P22223 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDH3P22223 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDH3P22223 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH3P22223 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDH3P22223 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH3P22223 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDH3P22223 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH3P22223 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 TSEN15P1-201ENST00000423257 515 ntBASIC16.04■□□□□ 0.16
CDH3P22223 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH3P22223 AC023141.5-201ENST00000458585 616 ntBASIC16.04■□□□□ 0.16
CDH3P22223 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH3P22223 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDH3P22223 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH3P22223 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.04■□□□□ 0.16
CDH3P22223 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH3P22223 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH3P22223 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 LINC00895-201ENST00000629028 1637 ntBASIC16.04■□□□□ 0.16
CDH3P22223 AC099063.4-201ENST00000641099 1602 ntBASIC16.04■□□□□ 0.16
CDH3P22223 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDH3P22223 AC063926.3-201ENST00000624734 5658 ntBASIC16.04■□□□□ 0.16
CDH3P22223 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH3P22223 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 AL391256.1-201ENST00000443260 1855 ntBASIC16.03■□□□□ 0.16
CDH3P22223 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH3P22223 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH3P22223 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.03■□□□□ 0.16
CDH3P22223 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDH3P22223 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH3P22223 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CDH3P22223 AC016027.1-202ENST00000607927 1699 ntBASIC16.03■□□□□ 0.16
CDH3P22223 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDH3P22223 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms