Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ERCC3P19447 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC3P19447 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC3P19447 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC3P19447 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.86■□□□□ 0.61
ERCC3P19447 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC3P19447 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.86■□□□□ 0.61
ERCC3P19447 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC3P19447 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.86■□□□□ 0.61
ERCC3P19447 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.86■□□□□ 0.61
ERCC3P19447 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.86■□□□□ 0.61
ERCC3P19447 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC3P19447 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ERCC3P19447 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.85■□□□□ 0.61
ERCC3P19447 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.85■□□□□ 0.61
ERCC3P19447 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ERCC3P19447 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
ERCC3P19447 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ERCC3P19447 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ERCC3P19447 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.85■□□□□ 0.61
ERCC3P19447 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.85■□□□□ 0.61
ERCC3P19447 AL080243.2-201ENST00000418783 582 ntBASIC18.85■□□□□ 0.61
ERCC3P19447 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.85■□□□□ 0.61
ERCC3P19447 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.85■□□□□ 0.61
ERCC3P19447 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.85■□□□□ 0.61
ERCC3P19447 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.85■□□□□ 0.61
ERCC3P19447 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.85■□□□□ 0.61
ERCC3P19447 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.85■□□□□ 0.61
ERCC3P19447 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.85■□□□□ 0.61
ERCC3P19447 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.85■□□□□ 0.61
ERCC3P19447 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ERCC3P19447 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC3P19447 AC007541.1-201ENST00000570282 1469 ntBASIC18.84■□□□□ 0.61
ERCC3P19447 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ERCC3P19447 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
ERCC3P19447 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ERCC3P19447 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ERCC3P19447 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.84■□□□□ 0.61
ERCC3P19447 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.84■□□□□ 0.61
ERCC3P19447 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.84■□□□□ 0.61
ERCC3P19447 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.84■□□□□ 0.61
ERCC3P19447 TP53TG3HP-202ENST00000569755 579 ntBASIC18.84■□□□□ 0.61
ERCC3P19447 AL132655.2-201ENST00000596276 594 ntBASIC18.84■□□□□ 0.61
ERCC3P19447 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.84■□□□□ 0.61
ERCC3P19447 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ERCC3P19447 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ERCC3P19447 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC3P19447 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ERCC3P19447 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ERCC3P19447 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
ERCC3P19447 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC3P19447 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC3P19447 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ERCC3P19447 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ERCC3P19447 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.83■□□□□ 0.61
ERCC3P19447 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC3P19447 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC3P19447 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC3P19447 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ERCC3P19447 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC3P19447 OR8S1-201ENST00000310194 1080 ntBASIC18.83■□□□□ 0.6
ERCC3P19447 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC3P19447 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC3P19447 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC3P19447 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms