Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-EP13747 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-EP13747 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HLA-EP13747 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-EP13747 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-EP13747 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-EP13747 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.44■□□□□ 0.22
HLA-EP13747 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.44■□□□□ 0.22
HLA-EP13747 AC135586.1-201ENST00000539323 574 ntBASIC16.44■□□□□ 0.22
HLA-EP13747 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-EP13747 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.44■□□□□ 0.22
HLA-EP13747 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-EP13747 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-EP13747 AL662799.1-202ENST00000614205 422 ntBASIC16.44■□□□□ 0.22
HLA-EP13747 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-EP13747 TNRC18P3-201ENST00000441896 2691 ntBASIC16.44■□□□□ 0.22
HLA-EP13747 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-EP13747 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-EP13747 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-EP13747 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-EP13747 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-EP13747 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-EP13747 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-EP13747 U82695.1-201ENST00000635752 1889 ntBASIC16.44■□□□□ 0.22
HLA-EP13747 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-EP13747 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-EP13747 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.43■□□□□ 0.22
HLA-EP13747 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-EP13747 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-EP13747 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-EP13747 AC005052.1-201ENST00000625181 2492 ntBASIC16.43■□□□□ 0.22
HLA-EP13747 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-EP13747 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-EP13747 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HLA-EP13747 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-EP13747 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
HLA-EP13747 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.43■□□□□ 0.22
HLA-EP13747 GNAQP1-201ENST00000444815 1067 ntBASIC16.43■□□□□ 0.22
HLA-EP13747 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-EP13747 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-EP13747 AC044860.1-202ENST00000559481 777 ntBASIC16.43■□□□□ 0.22
HLA-EP13747 AC010336.2-201ENST00000564226 506 ntBASIC16.43■□□□□ 0.22
HLA-EP13747 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-EP13747 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.43■□□□□ 0.22
HLA-EP13747 AC026979.3-201ENST00000607315 403 ntBASIC16.43■□□□□ 0.22
HLA-EP13747 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-EP13747 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-EP13747 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-EP13747 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HLA-EP13747 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-EP13747 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-EP13747 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HLA-EP13747 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-EP13747 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-EP13747 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-EP13747 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-EP13747 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-EP13747 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-EP13747 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-EP13747 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-EP13747 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-EP13747 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
HLA-EP13747 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-EP13747 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-EP13747 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-EP13747 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HLA-EP13747 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-EP13747 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.42■□□□□ 0.22
HLA-EP13747 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-EP13747 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-EP13747 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.42■□□□□ 0.22
HLA-EP13747 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 AC104794.3-201ENST00000566840 1248 ntBASIC16.42■□□□□ 0.22
HLA-EP13747 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-EP13747 SPDYE22P-201ENST00000582158 798 ntBASIC16.42■□□□□ 0.22
HLA-EP13747 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.42■□□□□ 0.22
HLA-EP13747 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.42■□□□□ 0.22
HLA-EP13747 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.42■□□□□ 0.22
HLA-EP13747 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.42■□□□□ 0.22
HLA-EP13747 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-EP13747 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-EP13747 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-EP13747 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-EP13747 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-EP13747 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms