Protein–RNA interactions for Protein: P12036

NEFH, Neurofilament heavy polypeptide, humanhuman

Predictions only

Length 1,026 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP12036 AL020989.1-201ENST00000422979 469 ntBASIC16.65■□□□□ 0.26
NEFHP12036 TMPOP1-202ENST00000424642 1267 ntBASIC16.65■□□□□ 0.26
NEFHP12036 CHCHD2P8-201ENST00000429873 447 ntBASIC16.65■□□□□ 0.26
NEFHP12036 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NEFHP12036 NUS1P1-201ENST00000446295 882 ntBASIC16.65■□□□□ 0.26
NEFHP12036 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.65■□□□□ 0.26
NEFHP12036 DUX4L17-201ENST00000557360 1267 ntBASIC16.65■□□□□ 0.26
NEFHP12036 AC011467.2-201ENST00000598425 242 ntBASIC16.65■□□□□ 0.26
NEFHP12036 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NEFHP12036 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.65■□□□□ 0.26
NEFHP12036 AL139011.1-202ENST00000642063 584 ntBASIC16.65■□□□□ 0.26
NEFHP12036 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NEFHP12036 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.65■□□□□ 0.26
NEFHP12036 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NEFHP12036 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEFHP12036 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
NEFHP12036 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NEFHP12036 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.65■□□□□ 0.26
NEFHP12036 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEFHP12036 GGT3P-204ENST00000453783 1664 ntBASIC16.65■□□□□ 0.26
NEFHP12036 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEFHP12036 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NEFHP12036 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.65■□□□□ 0.26
NEFHP12036 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.65■□□□□ 0.26
NEFHP12036 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
NEFHP12036 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NEFHP12036 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.64■□□□□ 0.25
NEFHP12036 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.64■□□□□ 0.25
NEFHP12036 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 BX276092.5-203ENST00000456199 560 ntBASIC16.64■□□□□ 0.25
NEFHP12036 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.64■□□□□ 0.25
NEFHP12036 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.64■□□□□ 0.25
NEFHP12036 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.64■□□□□ 0.25
NEFHP12036 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.64■□□□□ 0.25
NEFHP12036 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
NEFHP12036 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.64■□□□□ 0.25
NEFHP12036 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.64■□□□□ 0.25
NEFHP12036 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NEFHP12036 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 AC126335.2-201ENST00000623362 4637 ntBASIC16.64■□□□□ 0.25
NEFHP12036 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.64■□□□□ 0.25
NEFHP12036 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEFHP12036 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
NEFHP12036 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NEFHP12036 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 AL671710.1-201ENST00000610245 2349 ntBASIC16.63■□□□□ 0.25
NEFHP12036 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NEFHP12036 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.63■□□□□ 0.25
NEFHP12036 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
NEFHP12036 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NEFHP12036 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.63■□□□□ 0.25
NEFHP12036 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.63■□□□□ 0.25
NEFHP12036 AC013467.2-201ENST00000605472 835 ntBASIC16.63■□□□□ 0.25
NEFHP12036 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.63■□□□□ 0.25
NEFHP12036 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.63■□□□□ 0.25
NEFHP12036 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.63■□□□□ 0.25
NEFHP12036 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NEFHP12036 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NEFHP12036 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.63■□□□□ 0.25
NEFHP12036 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.63■□□□□ 0.25
NEFHP12036 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NEFHP12036 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEFHP12036 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms