Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VSIG8P0DPA2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.03□□□□□ -0.16
VSIG8P0DPA2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSIG8P0DPA2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VSIG8P0DPA2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VSIG8P0DPA2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.03□□□□□ -0.16
VSIG8P0DPA2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSIG8P0DPA2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSIG8P0DPA2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSIG8P0DPA2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 AC092919.2-201ENST00000623631 1645 ntBASIC14.02□□□□□ -0.16
VSIG8P0DPA2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.02□□□□□ -0.16
VSIG8P0DPA2 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.02□□□□□ -0.16
VSIG8P0DPA2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 AC021087.4-201ENST00000563761 564 ntBASIC14.02□□□□□ -0.17
VSIG8P0DPA2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 AL121772.3-201ENST00000610840 674 ntBASIC14.02□□□□□ -0.17
VSIG8P0DPA2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 AC107918.4-202ENST00000641623 219 ntBASIC14.02□□□□□ -0.17
VSIG8P0DPA2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VSIG8P0DPA2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 U82695.1-201ENST00000635752 1889 ntBASIC14.01□□□□□ -0.17
VSIG8P0DPA2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 KRT18P13-201ENST00000400056 1290 ntBASIC14.01□□□□□ -0.17
VSIG8P0DPA2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 FAAHP1-202ENST00000446499 1238 ntBASIC14.01□□□□□ -0.17
VSIG8P0DPA2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 AL160237.2-201ENST00000556165 472 ntBASIC14.01□□□□□ -0.17
VSIG8P0DPA2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.01□□□□□ -0.17
VSIG8P0DPA2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms