Protein–RNA interactions for Protein: P0DP42

TMEM225B, Transmembrane protein 225B, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM225BP0DP42 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.12□□□□□ -0.15
TMEM225BP0DP42 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 AF186996.4-201ENST00000467186 377 ntBASIC14.12□□□□□ -0.15
TMEM225BP0DP42 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM225BP0DP42 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.11□□□□□ -0.15
TMEM225BP0DP42 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 AC103702.1-201ENST00000548801 2630 ntBASIC14.11□□□□□ -0.15
TMEM225BP0DP42 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 AP002414.3-201ENST00000589352 1468 ntBASIC14.11□□□□□ -0.15
TMEM225BP0DP42 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM225BP0DP42 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms