Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 TK2-221ENST00000620035 5060 ntTSL 2 BASIC18.64■□□□□ 0.57
TPM2P07951 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TPM2P07951 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.64■□□□□ 0.57
TPM2P07951 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.64■□□□□ 0.57
TPM2P07951 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.64■□□□□ 0.57
TPM2P07951 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC18.63■□□□□ 0.57
TPM2P07951 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC18.63■□□□□ 0.57
TPM2P07951 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
TPM2P07951 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.63■□□□□ 0.57
TPM2P07951 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TPM2P07951 AC099336.1-202ENST00000602961 463 ntBASIC18.63■□□□□ 0.57
TPM2P07951 AC010331.1-201ENST00000611423 582 ntBASIC18.63■□□□□ 0.57
TPM2P07951 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.63■□□□□ 0.57
TPM2P07951 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC18.63■□□□□ 0.57
TPM2P07951 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.63■□□□□ 0.57
TPM2P07951 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TPM2P07951 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TPM2P07951 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.63■□□□□ 0.57
TPM2P07951 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.62■□□□□ 0.57
TPM2P07951 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 AC006486.2-201ENST00000624246 2199 ntBASIC18.62■□□□□ 0.57
TPM2P07951 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
TPM2P07951 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
TPM2P07951 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.62■□□□□ 0.57
TPM2P07951 HLA-J-202ENST00000469281 1241 ntBASIC18.62■□□□□ 0.57
TPM2P07951 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.62■□□□□ 0.57
TPM2P07951 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.62■□□□□ 0.57
TPM2P07951 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TPM2P07951 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TPM2P07951 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TPM2P07951 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TPM2P07951 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 AC005840.4-201ENST00000541242 2494 ntBASIC18.62■□□□□ 0.57
TPM2P07951 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.62■□□□□ 0.57
TPM2P07951 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.62■□□□□ 0.57
TPM2P07951 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TPM2P07951 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.62■□□□□ 0.57
TPM2P07951 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM2P07951 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TPM2P07951 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TPM2P07951 AC079781.5-202ENST00000641784 3743 ntBASIC18.62■□□□□ 0.57
TPM2P07951 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.62■□□□□ 0.57
TPM2P07951 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.62■□□□□ 0.57
TPM2P07951 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TPM2P07951 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.61■□□□□ 0.57
TPM2P07951 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TPM2P07951 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TPM2P07951 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TPM2P07951 LINC00895-201ENST00000629028 1637 ntBASIC18.61■□□□□ 0.57
TPM2P07951 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPM2P07951 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms