Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.87□□□□□ -0.03
P04436 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.87□□□□□ -0.03
P04436 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.87□□□□□ -0.03
P04436 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.87□□□□□ -0.03
P04436 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.87□□□□□ -0.03
P04436 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P04436 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.87□□□□□ -0.03
P04436 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04436 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
P04436 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04436 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04436 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
P04436 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P04436 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.87□□□□□ -0.03
P04436 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04436 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.87□□□□□ -0.03
P04436 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04436 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
P04436 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.86□□□□□ -0.03
P04436 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
P04436 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.86□□□□□ -0.03
P04436 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
P04436 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.86□□□□□ -0.03
P04436 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.86□□□□□ -0.03
P04436 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.86□□□□□ -0.03
P04436 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.86□□□□□ -0.03
P04436 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.86□□□□□ -0.03
P04436 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.86□□□□□ -0.03
P04436 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.86□□□□□ -0.03
P04436 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.86□□□□□ -0.03
P04436 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.86□□□□□ -0.03
P04436 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.86□□□□□ -0.03
P04436 SPDYE12P-201ENST00000618416 771 ntBASIC14.86□□□□□ -0.03
P04436 AJ011932.1-201ENST00000621707 465 ntBASIC14.86□□□□□ -0.03
P04436 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.86□□□□□ -0.03
P04436 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.86□□□□□ -0.03
P04436 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.86□□□□□ -0.03
P04436 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.86□□□□□ -0.03
P04436 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04436 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.85□□□□□ -0.03
P04436 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.85□□□□□ -0.03
P04436 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
P04436 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
P04436 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.85□□□□□ -0.03
P04436 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.85□□□□□ -0.03
P04436 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 AC092580.3-201ENST00000430932 139 ntBASIC14.85□□□□□ -0.03
P04436 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.85□□□□□ -0.03
P04436 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.85□□□□□ -0.03
P04436 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.85□□□□□ -0.03
P04436 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.85□□□□□ -0.03
P04436 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.85□□□□□ -0.03
P04436 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
P04436 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
P04436 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.85□□□□□ -0.03
P04436 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.85□□□□□ -0.03
P04436 MIR4321-201ENST00000592276 80 ntBASIC14.85□□□□□ -0.03
P04436 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.85□□□□□ -0.03
P04436 AL138828.2-201ENST00000615812 383 ntBASIC14.85□□□□□ -0.03
P04436 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
P04436 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
P04436 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms