Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
APOA1P02647 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.61□□□□□ -0.07
APOA1P02647 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.61□□□□□ -0.07
APOA1P02647 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.61□□□□□ -0.07
APOA1P02647 GCSHP2-201ENST00000560971 527 ntBASIC14.61□□□□□ -0.07
APOA1P02647 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.61□□□□□ -0.07
APOA1P02647 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.61□□□□□ -0.07
APOA1P02647 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.61□□□□□ -0.07
APOA1P02647 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.61□□□□□ -0.07
APOA1P02647 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
APOA1P02647 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.61□□□□□ -0.07
APOA1P02647 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.61□□□□□ -0.07
APOA1P02647 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
APOA1P02647 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOA1P02647 AL137784.3-201ENST00000623858 2288 ntBASIC14.61□□□□□ -0.07
APOA1P02647 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
APOA1P02647 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.6□□□□□ -0.07
APOA1P02647 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
APOA1P02647 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.6□□□□□ -0.07
APOA1P02647 AC112504.1-201ENST00000623415 1841 ntBASIC14.6□□□□□ -0.07
APOA1P02647 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.6□□□□□ -0.07
APOA1P02647 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.6□□□□□ -0.07
APOA1P02647 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 ECEL1P3-201ENST00000427961 737 ntBASIC14.6□□□□□ -0.07
APOA1P02647 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.6□□□□□ -0.07
APOA1P02647 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.6□□□□□ -0.07
APOA1P02647 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.6□□□□□ -0.07
APOA1P02647 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.6□□□□□ -0.07
APOA1P02647 DUX4L17-201ENST00000557360 1267 ntBASIC14.6□□□□□ -0.07
APOA1P02647 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.6□□□□□ -0.07
APOA1P02647 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.6□□□□□ -0.07
APOA1P02647 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.6□□□□□ -0.07
APOA1P02647 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.6□□□□□ -0.07
APOA1P02647 CDC14C-201ENST00000428251 1719 ntBASIC14.6□□□□□ -0.07
APOA1P02647 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
APOA1P02647 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOA1P02647 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.6□□□□□ -0.07
APOA1P02647 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.59□□□□□ -0.07
APOA1P02647 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
APOA1P02647 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOA1P02647 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOA1P02647 AC007191.1-201ENST00000623179 2995 ntBASIC14.59□□□□□ -0.07
APOA1P02647 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOA1P02647 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOA1P02647 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOA1P02647 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOA1P02647 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOA1P02647 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOA1P02647 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.59□□□□□ -0.07
APOA1P02647 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOA1P02647 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOA1P02647 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms