Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.71□□□□□ -0.21
SIX6O95475 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SIX6O95475 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.71□□□□□ -0.21
SIX6O95475 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SIX6O95475 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.71□□□□□ -0.21
SIX6O95475 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 KRT18P6-201ENST00000555540 1265 ntBASIC13.71□□□□□ -0.21
SIX6O95475 AL512604.3-201ENST00000569583 964 ntBASIC13.71□□□□□ -0.21
SIX6O95475 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.71□□□□□ -0.21
SIX6O95475 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SIX6O95475 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SIX6O95475 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIX6O95475 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SIX6O95475 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SIX6O95475 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SIX6O95475 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SIX6O95475 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
SIX6O95475 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SIX6O95475 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.7□□□□□ -0.22
SIX6O95475 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.7□□□□□ -0.22
SIX6O95475 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.7□□□□□ -0.22
SIX6O95475 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.7□□□□□ -0.22
SIX6O95475 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
SIX6O95475 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SIX6O95475 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SIX6O95475 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.7□□□□□ -0.22
SIX6O95475 AC003669.1-201ENST00000334569 611 ntBASIC13.7□□□□□ -0.22
SIX6O95475 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
SIX6O95475 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 MIR648-201ENST00000385046 94 ntBASIC13.7□□□□□ -0.22
SIX6O95475 AP000523.1-201ENST00000398242 1049 ntBASIC13.7□□□□□ -0.22
SIX6O95475 KLF4P1-201ENST00000412782 1185 ntBASIC13.7□□□□□ -0.22
SIX6O95475 HLA-F-220ENST00000434407 884 ntBASIC13.7□□□□□ -0.22
SIX6O95475 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.7□□□□□ -0.22
SIX6O95475 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.7□□□□□ -0.22
SIX6O95475 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 EGLN1P1-201ENST00000531623 762 ntBASIC13.7□□□□□ -0.22
SIX6O95475 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.7□□□□□ -0.22
SIX6O95475 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.7□□□□□ -0.22
SIX6O95475 GPR32P1-201ENST00000601788 811 ntBASIC13.7□□□□□ -0.22
SIX6O95475 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
SIX6O95475 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.7□□□□□ -0.22
SIX6O95475 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
SIX6O95475 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SIX6O95475 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.7□□□□□ -0.22
SIX6O95475 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
SIX6O95475 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SIX6O95475 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIX6O95475 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.69□□□□□ -0.22
SIX6O95475 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.69□□□□□ -0.22
SIX6O95475 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SIX6O95475 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.69□□□□□ -0.22
SIX6O95475 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SIX6O95475 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.69□□□□□ -0.22
SIX6O95475 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.69□□□□□ -0.22
SIX6O95475 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.69□□□□□ -0.22
SIX6O95475 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.69□□□□□ -0.22
SIX6O95475 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms