Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 TCAF2P1-201ENST00000291129 2421 ntBASIC11.9□□□□□ -0.5
TNFRSF6BO95407 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 AC148477.5-201ENST00000625164 1645 ntBASIC11.9□□□□□ -0.5
TNFRSF6BO95407 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 AC011558.1-201ENST00000623459 338 ntBASIC11.9□□□□□ -0.5
TNFRSF6BO95407 AL590326.2-201ENST00000625139 305 ntBASIC11.9□□□□□ -0.5
TNFRSF6BO95407 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.9□□□□□ -0.5
TNFRSF6BO95407 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
TNFRSF6BO95407 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
TNFRSF6BO95407 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TNFRSF6BO95407 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TNFRSF6BO95407 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
TNFRSF6BO95407 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TNFRSF6BO95407 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.9□□□□□ -0.51
TNFRSF6BO95407 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.9□□□□□ -0.51
TNFRSF6BO95407 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 CICP24-201ENST00000605464 2705 ntBASIC11.89□□□□□ -0.51
TNFRSF6BO95407 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 AC106881.1-201ENST00000605849 3329 ntBASIC11.89□□□□□ -0.51
TNFRSF6BO95407 AC073508.3-201ENST00000619697 1419 ntBASIC11.89□□□□□ -0.51
TNFRSF6BO95407 CICP13-201ENST00000422015 2789 ntBASIC11.89□□□□□ -0.51
TNFRSF6BO95407 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 LINC00982-205ENST00000420957 435 ntBASIC11.89□□□□□ -0.51
TNFRSF6BO95407 AL845331.1-201ENST00000424978 1190 ntBASIC11.89□□□□□ -0.51
TNFRSF6BO95407 LIN28AP1-201ENST00000429574 405 ntBASIC11.89□□□□□ -0.51
TNFRSF6BO95407 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.89□□□□□ -0.51
TNFRSF6BO95407 TSPY15P-201ENST00000457163 923 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms