Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 DUX4L45-201ENST00000566406 1057 ntBASIC21.19■□□□□ 0.98
LTN1O94822 BTNL10-201ENST00000595971 695 ntBASIC21.19■□□□□ 0.98
LTN1O94822 METTL26-214ENST00000614890 801 ntTSL 3 BASIC21.19■□□□□ 0.98
LTN1O94822 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LTN1O94822 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LTN1O94822 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LTN1O94822 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LTN1O94822 AC092171.3-201ENST00000610122 2651 ntBASIC21.19■□□□□ 0.98
LTN1O94822 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.18■□□□□ 0.98
LTN1O94822 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
LTN1O94822 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 TPO-206ENST00000382269 1155 ntTSL 5 BASIC21.18■□□□□ 0.98
LTN1O94822 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 MIR1247-201ENST00000408206 136 ntBASIC21.18■□□□□ 0.98
LTN1O94822 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC21.18■□□□□ 0.98
LTN1O94822 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC21.18■□□□□ 0.98
LTN1O94822 AC022137.2-201ENST00000503482 481 ntBASIC21.18■□□□□ 0.98
LTN1O94822 DERL2-202ENST00000570848 657 ntTSL 5 BASIC21.18■□□□□ 0.98
LTN1O94822 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC21.18■□□□□ 0.98
LTN1O94822 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC21.18■□□□□ 0.98
LTN1O94822 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LTN1O94822 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.18■□□□□ 0.98
LTN1O94822 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 ZNF767P-206ENST00000513792 565 ntBASIC21.18■□□□□ 0.98
LTN1O94822 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC21.18■□□□□ 0.98
LTN1O94822 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LTN1O94822 AP001889.1-201ENST00000525414 633 ntBASIC21.18■□□□□ 0.98
LTN1O94822 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.18■□□□□ 0.98
LTN1O94822 CLUHP6-201ENST00000580789 941 ntBASIC21.18■□□□□ 0.98
LTN1O94822 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTN1O94822 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LTN1O94822 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LTN1O94822 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LTN1O94822 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LTN1O94822 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LTN1O94822 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.17■□□□□ 0.98
LTN1O94822 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.17■□□□□ 0.98
LTN1O94822 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LTN1O94822 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
LTN1O94822 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LTN1O94822 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
LTN1O94822 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LTN1O94822 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LTN1O94822 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC21.17■□□□□ 0.98
LTN1O94822 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21.17■□□□□ 0.98
LTN1O94822 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LTN1O94822 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LTN1O94822 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.17■□□□□ 0.98
LTN1O94822 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.17■□□□□ 0.98
LTN1O94822 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC21.17■□□□□ 0.98
LTN1O94822 BAATP1-201ENST00000412284 1225 ntBASIC21.17■□□□□ 0.98
LTN1O94822 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LTN1O94822 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LTN1O94822 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC21.17■□□□□ 0.98
LTN1O94822 FAM8A2P-201ENST00000528813 1142 ntBASIC21.17■□□□□ 0.98
LTN1O94822 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.17■□□□□ 0.98
LTN1O94822 AC015910.1-201ENST00000579400 975 ntBASIC21.17■□□□□ 0.98
LTN1O94822 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC21.17■□□□□ 0.98
LTN1O94822 RHOXF1P1-202ENST00000635473 501 ntBASIC21.17■□□□□ 0.98
LTN1O94822 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LTN1O94822 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.17■□□□□ 0.98
LTN1O94822 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LTN1O94822 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.17■□□□□ 0.98
LTN1O94822 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LTN1O94822 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LTN1O94822 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LTN1O94822 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LTN1O94822 RNU1-114P-201ENST00000365297 166 ntBASIC21.16■□□□□ 0.98
LTN1O94822 AL133267.1-201ENST00000398220 340 ntBASIC21.16■□□□□ 0.98
LTN1O94822 FO681548.1-201ENST00000455617 1132 ntBASIC21.16■□□□□ 0.98
LTN1O94822 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC21.16■□□□□ 0.98
LTN1O94822 SNX12-206ENST00000622259 661 ntTSL 5 BASIC21.16■□□□□ 0.98
LTN1O94822 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC21.16■□□□□ 0.98
LTN1O94822 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LTN1O94822 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LTN1O94822 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.16■□□□□ 0.98
LTN1O94822 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LTN1O94822 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LTN1O94822 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LTN1O94822 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LTN1O94822 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LTN1O94822 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.16■□□□□ 0.98
LTN1O94822 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LTN1O94822 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.16■□□□□ 0.98
LTN1O94822 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LTN1O94822 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
LTN1O94822 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LTN1O94822 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms