Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
HCN1O60741 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
HCN1O60741 PMS2P2-201ENST00000425039 1128 ntBASIC15.3■□□□□ 0.04
HCN1O60741 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.3■□□□□ 0.04
HCN1O60741 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.3■□□□□ 0.04
HCN1O60741 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.3■□□□□ 0.04
HCN1O60741 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 AP000344.2-201ENST00000512987 629 ntBASIC15.3■□□□□ 0.04
HCN1O60741 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.3■□□□□ 0.04
HCN1O60741 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
HCN1O60741 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.3■□□□□ 0.04
HCN1O60741 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.3■□□□□ 0.04
HCN1O60741 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.3■□□□□ 0.04
HCN1O60741 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
HCN1O60741 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.3■□□□□ 0.04
HCN1O60741 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.3■□□□□ 0.04
HCN1O60741 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HCN1O60741 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.3■□□□□ 0.04
HCN1O60741 AC013467.2-201ENST00000605472 835 ntBASIC15.3■□□□□ 0.04
HCN1O60741 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HCN1O60741 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HCN1O60741 AC092902.6-201ENST00000641783 218 ntBASIC15.3■□□□□ 0.04
HCN1O60741 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HCN1O60741 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HCN1O60741 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HCN1O60741 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HCN1O60741 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
HCN1O60741 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HCN1O60741 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HCN1O60741 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
HCN1O60741 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 AC006277.1-201ENST00000624348 1610 ntBASIC15.29■□□□□ 0.04
HCN1O60741 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.29■□□□□ 0.04
HCN1O60741 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.29■□□□□ 0.04
HCN1O60741 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.29■□□□□ 0.04
HCN1O60741 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.29■□□□□ 0.04
HCN1O60741 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HCN1O60741 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 AC140658.5-201ENST00000438532 169 ntBASIC15.29■□□□□ 0.04
HCN1O60741 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.29■□□□□ 0.04
HCN1O60741 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.29■□□□□ 0.04
HCN1O60741 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HCN1O60741 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.29■□□□□ 0.04
HCN1O60741 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.29■□□□□ 0.04
HCN1O60741 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.29■□□□□ 0.04
HCN1O60741 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
HCN1O60741 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 ALOX12P2-203ENST00000570921 1945 ntBASIC15.29■□□□□ 0.04
HCN1O60741 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HCN1O60741 NORAD-201ENST00000565493 5339 ntBASIC15.29■□□□□ 0.04
HCN1O60741 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.28■□□□□ 0.04
HCN1O60741 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.28■□□□□ 0.04
HCN1O60741 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
HCN1O60741 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 AL353732.1-201ENST00000569618 1459 ntBASIC15.28■□□□□ 0.04
HCN1O60741 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
HCN1O60741 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HCN1O60741 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.28■□□□□ 0.04
HCN1O60741 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.28■□□□□ 0.04
HCN1O60741 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCN1O60741 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms