Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN3O15551 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN3O15551 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN3O15551 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN3O15551 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN3O15551 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.8■□□□□ 0.44
CLDN3O15551 MIR4453-201ENST00000584019 89 ntBASIC17.8■□□□□ 0.44
CLDN3O15551 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN3O15551 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
CLDN3O15551 AL365330.1-201ENST00000607459 531 ntBASIC17.8■□□□□ 0.44
CLDN3O15551 AC003101.2-201ENST00000612557 442 ntBASIC17.8■□□□□ 0.44
CLDN3O15551 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN3O15551 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN3O15551 AL592424.1-201ENST00000563624 1536 ntBASIC17.8■□□□□ 0.44
CLDN3O15551 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLDN3O15551 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CLDN3O15551 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN3O15551 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN3O15551 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLDN3O15551 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
CLDN3O15551 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CLDN3O15551 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN3O15551 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN3O15551 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CLDN3O15551 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN3O15551 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLDN3O15551 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN3O15551 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.79■□□□□ 0.44
CLDN3O15551 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN3O15551 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN3O15551 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN3O15551 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN3O15551 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CLDN3O15551 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 AL353705.2-201ENST00000428243 662 ntBASIC17.79■□□□□ 0.44
CLDN3O15551 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN3O15551 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
CLDN3O15551 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.79■□□□□ 0.44
CLDN3O15551 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.79■□□□□ 0.44
CLDN3O15551 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN3O15551 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN3O15551 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN3O15551 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.79■□□□□ 0.44
CLDN3O15551 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN3O15551 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CLDN3O15551 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN3O15551 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN3O15551 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CLDN3O15551 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN3O15551 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CLDN3O15551 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN3O15551 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN3O15551 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLDN3O15551 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLDN3O15551 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN3O15551 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CLDN3O15551 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN3O15551 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLDN3O15551 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN3O15551 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN3O15551 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN3O15551 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.78■□□□□ 0.44
CLDN3O15551 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN3O15551 KLF2P3-201ENST00000451977 1087 ntBASIC17.78■□□□□ 0.44
CLDN3O15551 AC051619.7-201ENST00000568314 623 ntBASIC17.78■□□□□ 0.44
CLDN3O15551 AC061975.2-201ENST00000581722 295 ntBASIC17.78■□□□□ 0.44
CLDN3O15551 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN3O15551 LINC02199-201ENST00000506655 2702 ntBASIC17.78■□□□□ 0.44
CLDN3O15551 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLDN3O15551 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN3O15551 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLDN3O15551 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN3O15551 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLDN3O15551 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms