Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN1O15353 AC016027.1-202ENST00000607927 1699 ntBASIC19.4■□□□□ 0.7
FOXN1O15353 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN1O15353 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN1O15353 BTBD6P1-201ENST00000412176 1267 ntBASIC19.4■□□□□ 0.7
FOXN1O15353 AC098850.1-201ENST00000419919 790 ntBASIC19.4■□□□□ 0.7
FOXN1O15353 KLF2P4-201ENST00000451959 1225 ntBASIC19.4■□□□□ 0.7
FOXN1O15353 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXN1O15353 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXN1O15353 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN1O15353 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXN1O15353 MIR4722-201ENST00000578292 60 ntBASIC19.4■□□□□ 0.7
FOXN1O15353 AC005412.3-201ENST00000580309 715 ntBASIC19.4■□□□□ 0.7
FOXN1O15353 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXN1O15353 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.4■□□□□ 0.7
FOXN1O15353 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXN1O15353 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.4■□□□□ 0.7
FOXN1O15353 WFDC1-204ENST00000613603 549 ntBASIC19.4■□□□□ 0.7
FOXN1O15353 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN1O15353 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXN1O15353 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXN1O15353 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXN1O15353 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXN1O15353 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
FOXN1O15353 AC138932.1-201ENST00000534164 6830 ntBASIC19.4■□□□□ 0.7
FOXN1O15353 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN1O15353 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXN1O15353 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN1O15353 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
FOXN1O15353 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.39■□□□□ 0.7
FOXN1O15353 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.39■□□□□ 0.7
FOXN1O15353 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXN1O15353 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXN1O15353 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN1O15353 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN1O15353 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN1O15353 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXN1O15353 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN1O15353 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXN1O15353 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
FOXN1O15353 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.39■□□□□ 0.69
FOXN1O15353 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXN1O15353 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXN1O15353 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.39■□□□□ 0.69
FOXN1O15353 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXN1O15353 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN1O15353 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXN1O15353 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXN1O15353 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXN1O15353 RN7SL828P-201ENST00000607615 303 ntBASIC19.39■□□□□ 0.69
FOXN1O15353 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN1O15353 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXN1O15353 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
FOXN1O15353 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN1O15353 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
FOXN1O15353 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN1O15353 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXN1O15353 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
FOXN1O15353 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN1O15353 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXN1O15353 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXN1O15353 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN1O15353 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXN1O15353 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
FOXN1O15353 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXN1O15353 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.38■□□□□ 0.69
FOXN1O15353 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
FOXN1O15353 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.38■□□□□ 0.69
FOXN1O15353 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
FOXN1O15353 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.38■□□□□ 0.69
FOXN1O15353 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FOXN1O15353 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXN1O15353 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
FOXN1O15353 C2orf69P2-201ENST00000562032 1123 ntBASIC19.38■□□□□ 0.69
FOXN1O15353 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXN1O15353 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.38■□□□□ 0.69
FOXN1O15353 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXN1O15353 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.38■□□□□ 0.69
FOXN1O15353 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
FOXN1O15353 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXN1O15353 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN1O15353 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms