Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 GNAQP1-201ENST00000444815 1067 ntBASIC16.27■□□□□ 0.2
MID1O15344 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 ZNF890P-202ENST00000530367 1156 ntBASIC16.27■□□□□ 0.2
MID1O15344 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 AC104794.3-201ENST00000566840 1248 ntBASIC16.27■□□□□ 0.2
MID1O15344 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 AL132655.2-201ENST00000596276 594 ntBASIC16.27■□□□□ 0.2
MID1O15344 AL365330.1-201ENST00000607459 531 ntBASIC16.27■□□□□ 0.2
MID1O15344 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.27■□□□□ 0.2
MID1O15344 AL033527.5-202ENST00000641632 1098 ntBASIC16.27■□□□□ 0.2
MID1O15344 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.27■□□□□ 0.2
MID1O15344 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
MID1O15344 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
MID1O15344 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
MID1O15344 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.27■□□□□ 0.19
MID1O15344 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MID1O15344 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MID1O15344 AC007541.1-201ENST00000570282 1469 ntBASIC16.27■□□□□ 0.19
MID1O15344 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MID1O15344 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
MID1O15344 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MID1O15344 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
MID1O15344 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.19
MID1O15344 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.27■□□□□ 0.19
MID1O15344 AC106886.4-201ENST00000623557 2502 ntBASIC16.26■□□□□ 0.19
MID1O15344 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.26■□□□□ 0.19
MID1O15344 AC063926.2-201ENST00000623766 1308 ntBASIC16.26■□□□□ 0.19
MID1O15344 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.26■□□□□ 0.19
MID1O15344 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
MID1O15344 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
MID1O15344 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MID1O15344 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.26■□□□□ 0.19
MID1O15344 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.26■□□□□ 0.19
MID1O15344 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.26■□□□□ 0.19
MID1O15344 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.26■□□□□ 0.19
MID1O15344 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.26■□□□□ 0.19
MID1O15344 MIR4321-201ENST00000592276 80 ntBASIC16.26■□□□□ 0.19
MID1O15344 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.26■□□□□ 0.19
MID1O15344 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 BTBD7P1-201ENST00000447253 1453 ntBASIC16.26■□□□□ 0.19
MID1O15344 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MID1O15344 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MID1O15344 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.26■□□□□ 0.19
MID1O15344 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MID1O15344 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MID1O15344 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.26■□□□□ 0.19
MID1O15344 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MID1O15344 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MID1O15344 AC022211.2-201ENST00000585075 2527 ntBASIC16.25■□□□□ 0.19
MID1O15344 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.25■□□□□ 0.19
MID1O15344 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MID1O15344 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.25■□□□□ 0.19
MID1O15344 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.25■□□□□ 0.19
MID1O15344 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
MID1O15344 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MID1O15344 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MID1O15344 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
MID1O15344 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MID1O15344 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.25■□□□□ 0.19
MID1O15344 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.25■□□□□ 0.19
MID1O15344 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MID1O15344 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MID1O15344 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MID1O15344 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.25■□□□□ 0.19
MID1O15344 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
MID1O15344 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MID1O15344 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.25■□□□□ 0.19
MID1O15344 SPDYE18-201ENST00000510091 1050 ntBASIC16.25■□□□□ 0.19
MID1O15344 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MID1O15344 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.25■□□□□ 0.19
MID1O15344 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.25■□□□□ 0.19
MID1O15344 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MID1O15344 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.25■□□□□ 0.19
MID1O15344 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.25■□□□□ 0.19
MID1O15344 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.25■□□□□ 0.19
MID1O15344 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.25■□□□□ 0.19
MID1O15344 NFIC-211ENST00000641145 8399 ntBASIC16.25■□□□□ 0.19
MID1O15344 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms