Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
O00370 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
O00370 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 AC142381.1-201ENST00000426099 345 ntBASIC17.4■□□□□ 0.38
O00370 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.4■□□□□ 0.38
O00370 AC004967.1-201ENST00000453589 447 ntBASIC17.4■□□□□ 0.38
O00370 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.4■□□□□ 0.38
O00370 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.4■□□□□ 0.38
O00370 AC105233.2-201ENST00000523697 349 ntBASIC17.4■□□□□ 0.38
O00370 AF228730.5-201ENST00000530288 346 ntBASIC17.4■□□□□ 0.38
O00370 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.4■□□□□ 0.38
O00370 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.4■□□□□ 0.38
O00370 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.4■□□□□ 0.38
O00370 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.4■□□□□ 0.38
O00370 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.4■□□□□ 0.38
O00370 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.4■□□□□ 0.38
O00370 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.4■□□□□ 0.38
O00370 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.4■□□□□ 0.38
O00370 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.4■□□□□ 0.38
O00370 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
O00370 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
O00370 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.4■□□□□ 0.38
O00370 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 MTHFR-217ENST00000641820 1569 ntBASIC17.4■□□□□ 0.38
O00370 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.4■□□□□ 0.38
O00370 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
O00370 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
O00370 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.4■□□□□ 0.38
O00370 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
O00370 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
O00370 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
O00370 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
O00370 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.39■□□□□ 0.37
O00370 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
O00370 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.39■□□□□ 0.37
O00370 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 MIR346-201ENST00000362234 95 ntBASIC17.39■□□□□ 0.37
O00370 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.39■□□□□ 0.37
O00370 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.39■□□□□ 0.37
O00370 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.39■□□□□ 0.37
O00370 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 AL592309.1-201ENST00000443127 649 ntBASIC17.39■□□□□ 0.37
O00370 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.39■□□□□ 0.37
O00370 AP000344.2-201ENST00000512987 629 ntBASIC17.39■□□□□ 0.37
O00370 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.39■□□□□ 0.37
O00370 KRT8P23-201ENST00000560090 1207 ntBASIC17.39■□□□□ 0.37
O00370 AP000842.3-202ENST00000569238 1080 ntBASIC17.39■□□□□ 0.37
O00370 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.39■□□□□ 0.37
O00370 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.39■□□□□ 0.37
O00370 AC084121.4-201ENST00000641598 221 ntBASIC17.39■□□□□ 0.37
O00370 AF228730.8-201ENST00000642140 221 ntBASIC17.39■□□□□ 0.37
O00370 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.39■□□□□ 0.37
O00370 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
O00370 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
O00370 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
O00370 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.38■□□□□ 0.37
O00370 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
O00370 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.38■□□□□ 0.37
O00370 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.38■□□□□ 0.37
O00370 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
O00370 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.38■□□□□ 0.37
O00370 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.38■□□□□ 0.37
O00370 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.38■□□□□ 0.37
O00370 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.38■□□□□ 0.37
O00370 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.38■□□□□ 0.37
O00370 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.38■□□□□ 0.37
O00370 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.38■□□□□ 0.37
O00370 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.38■□□□□ 0.37
O00370 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
O00370 AC093520.2-201ENST00000561830 333 ntBASIC17.38■□□□□ 0.37
O00370 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.38■□□□□ 0.37
O00370 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
O00370 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.38■□□□□ 0.37
O00370 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms