Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC12.49□□□□□ -0.41
COLCA2A8K830 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.49□□□□□ -0.41
COLCA2A8K830 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.49□□□□□ -0.41
COLCA2A8K830 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.49□□□□□ -0.41
COLCA2A8K830 AC019129.2-201ENST00000609837 1235 ntBASIC12.49□□□□□ -0.41
COLCA2A8K830 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 AC130371.2-201ENST00000619443 611 ntBASIC12.49□□□□□ -0.41
COLCA2A8K830 AC112497.1-201ENST00000624824 639 ntBASIC12.49□□□□□ -0.41
COLCA2A8K830 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.49□□□□□ -0.41
COLCA2A8K830 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
COLCA2A8K830 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.49□□□□□ -0.41
COLCA2A8K830 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.49□□□□□ -0.41
COLCA2A8K830 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
COLCA2A8K830 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.48□□□□□ -0.41
COLCA2A8K830 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.48□□□□□ -0.41
COLCA2A8K830 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
COLCA2A8K830 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.48□□□□□ -0.41
COLCA2A8K830 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.48□□□□□ -0.41
COLCA2A8K830 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
COLCA2A8K830 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.48□□□□□ -0.41
COLCA2A8K830 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
COLCA2A8K830 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 COX5BP2-201ENST00000392354 334 ntBASIC12.48□□□□□ -0.41
COLCA2A8K830 AC096633.1-201ENST00000422446 749 ntBASIC12.48□□□□□ -0.41
COLCA2A8K830 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.48□□□□□ -0.41
COLCA2A8K830 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.48□□□□□ -0.41
COLCA2A8K830 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.48□□□□□ -0.41
COLCA2A8K830 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.48□□□□□ -0.41
COLCA2A8K830 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.48□□□□□ -0.41
COLCA2A8K830 DBI-210ENST00000542275 757 ntTSL 5 BASIC12.48□□□□□ -0.41
COLCA2A8K830 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.48□□□□□ -0.41
COLCA2A8K830 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
COLCA2A8K830 AC109462.3-201ENST00000573934 613 ntBASIC12.48□□□□□ -0.41
COLCA2A8K830 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.48□□□□□ -0.41
COLCA2A8K830 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.48□□□□□ -0.41
COLCA2A8K830 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
COLCA2A8K830 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 PCGF3-213ENST00000620529 1899 ntBASIC12.48□□□□□ -0.41
COLCA2A8K830 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.48□□□□□ -0.41
COLCA2A8K830 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.48□□□□□ -0.41
COLCA2A8K830 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
COLCA2A8K830 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.48□□□□□ -0.41
COLCA2A8K830 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
COLCA2A8K830 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
COLCA2A8K830 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
COLCA2A8K830 MIR600HG-201ENST00000449175 5984 ntBASIC12.47□□□□□ -0.41
COLCA2A8K830 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.47□□□□□ -0.41
COLCA2A8K830 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
COLCA2A8K830 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
COLCA2A8K830 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.47□□□□□ -0.41
COLCA2A8K830 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COLCA2A8K830 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
COLCA2A8K830 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COLCA2A8K830 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.47□□□□□ -0.41
COLCA2A8K830 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
COLCA2A8K830 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COLCA2A8K830 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COLCA2A8K830 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.47□□□□□ -0.41
COLCA2A8K830 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.47□□□□□ -0.41
COLCA2A8K830 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms