Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 BTBD7P1-201ENST00000447253 1453 ntBASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 AL512361.1-201ENST00000554200 418 ntBASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 AL365330.1-201ENST00000607459 531 ntBASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 AC044860.1-202ENST00000559481 777 ntBASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 AC010336.2-201ENST00000564226 506 ntBASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 AL132655.2-201ENST00000596276 594 ntBASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 AL033527.5-202ENST00000641632 1098 ntBASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TBC1D3FA6NER0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 AC080080.1-201ENST00000625121 2420 ntBASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms