Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 AC120498.9-201ENST00000339021 3867 ntBASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 AC025279.2-201ENST00000569730 653 ntBASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CDC42BPBQ9Y5S2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 AC103810.3-201ENST00000583567 96 ntBASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPBQ9Y5S2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 MIR326-201ENST00000362220 95 ntBASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 AL590640.2-201ENST00000457038 527 ntBASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CDC42BPBQ9Y5S2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 AGER-203ENST00000375065 665 ntTSL 2 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 RHOQP1-201ENST00000555758 579 ntBASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 AC008687.7-202ENST00000637404 953 ntBASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms